RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 COL17A1Q9UMD9 1497 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 B8ZZF3 427 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 F8W031 263 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 CASQ2O14958 399 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 MCF2LO15068 1137 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 KATNA1O75449 491 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 GTF2H1P32780 548 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 PCYT1AP49585 367 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 PLCB3Q01970 1234 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 CKAP4Q07065 602 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 TBX2Q13207 712 aaPredicted RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 MMAAQ8IVH4 418 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 IQCKQ8N0W5 287 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 FLAD1Q8NFF5 587 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 DGCR14Q96DF8 476 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 CEP19Q96LK0 163 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 MRPL1Q9BYD6 325 aaKnown RBP11.68□□□□□ -0.54
CCDC171-202ENST00000432954 SLC38A10Q9HBR0 1119 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 TCEAL9Q9UHQ7 104 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 COQ6Q9Y2Z9 468 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 ABCC12Q96J65 1359 aa11.68□□□□□ -0.54
CCDC171-202ENST00000432954 ARHGEF12Q9NZN5 1544 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 CHD1O14646 1710 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ALOX15BO15296 676 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 MAP3K7CLP57077 242 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 NAA20P61599 178 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 POLA2Q14181 598 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 MTERF2Q49AM1 385 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 FBXO43Q4G163 708 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ZNF569Q5MCW4 686 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 DTHD1Q6ZMT9 781 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 USP43Q70EL4 1123 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 CPLX4Q7Z7G2 160 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 CHPFQ8IZ52 775 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 KLHL29Q96CT2 875 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 AGXT2Q9BYV1 514 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 FAM114A2Q9NRY5 505 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ABI2Q9NYB9 513 aaPredicted RBP11.67□□□□□ -0.54
CCDC171-202ENST00000432954 PFDN2Q9UHV9 154 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ERVK-11Q9UQG0 969 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 IFT52Q9Y366 437 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 KRBA1A5PL33 1030 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ZSCAN5BA6NJL1 495 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 KRT75O95678 551 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 TRIM27P14373 513 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 MTHFRP42898 656 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 FANCCQ00597 558 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 NFIAQ12857 509 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 PARP6Q2NL67 630 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 FAM26DQ5JW98 314 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 RNASEH2BQ5TBB1 312 aaKnown RBP11.67□□□□□ -0.54
CCDC171-202ENST00000432954 MAP3K21Q5TCX8 1036 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 SHEQ5VZ18 495 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ZNF704Q6ZNC4 412 aaPredicted RBP11.67□□□□□ -0.54
CCDC171-202ENST00000432954 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 PIGWQ7Z7B1 504 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 SCYL3Q8IZE3 742 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ST13P4Q8IZP2 240 aaPredicted RBP11.67□□□□□ -0.54
CCDC171-202ENST00000432954 CDC26Q8NHZ8 85 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 AIFM3Q96NN9 605 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 XPO6Q96QU8 1125 aaKnown RBP11.67□□□□□ -0.54
CCDC171-202ENST00000432954 SECISBP2Q96T21 854 aaKnown RBP11.67□□□□□ -0.54
CCDC171-202ENST00000432954 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ECT2Q9H8V3 914 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 NMRK1Q9NWW6 199 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 RTCBQ9Y3I0 505 aaKnown RBP11.67□□□□□ -0.54
CCDC171-202ENST00000432954 RWDD3Q9Y3V2 267 aa11.67□□□□□ -0.54
CCDC171-202ENST00000432954 ST20-MTHFSA0A0A6YYL1 179 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 SOBPA7XYQ1 873 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 ADAMTS4O75173 837 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 PIM1P11309 404 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-202ENST00000432954 TCEA1P23193 301 aaKnown RBP11.66□□□□□ -0.54
CCDC171-202ENST00000432954 CRABP2P29373 138 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 ADSLP30566 484 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-202ENST00000432954 OLR1P78380 273 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 TMF1P82094 1093 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 KRT76Q01546 638 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 SQLEQ14534 574 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 NFE2Q16621 373 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-202ENST00000432954 CYP4A22Q5TCH4 519 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 FAM171BQ6P995 826 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 SFR1Q86XK3 245 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 ATP6V0D2Q8N8Y2 350 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 TSEN2Q8NCE0 465 aaKnown RBP11.66□□□□□ -0.54
CCDC171-202ENST00000432954 C9orf78Q9NZ63 289 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-202ENST00000432954 EHD2Q9NZN4 543 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 CASZ1Q86V15 1759 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 MYO5CQ9NQX4 1742 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 KDM6BO15054 1643 aa11.66□□□□□ -0.54
CCDC171-202ENST00000432954 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 BHMG1C9JSJ3 638 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 RGS13O14921 159 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 ECE2O60344 883 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 IL10P22301 178 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 ALAS2P22557 587 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 KRT20P35900 424 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 MAPKAPK2P49137 400 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms