RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 CLUL1Q15846 466 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 XKR3Q5GH77 459 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 CPLX2Q6PUV4 134 aaKnown RBP10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 MIER3Q7Z3K6 550 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 KRT25Q7Z3Z0 450 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 COLGALT1Q8NBJ5 622 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 SMRP1Q8NCR6 262 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 POP1Q99575 1024 aaKnown RBP10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 TMEM117Q9H0C3 514 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 IGFLR1Q9H665 355 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 TLR9Q9NR96 1032 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 PDRG1Q9NUG6 133 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 TYW1Q9NV66 732 aaKnown RBP10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 MUC6Q6W4X9 2439 aa10.59□□□□□ -0.71
CDC42-IT1-201ENST00000431803 STK36Q9NRP7 1315 aa10.58□□□□□ -0.71
CDC42-IT1-201ENST00000431803 A0A0U1RQF3 1178 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TMEM150BA6NC51 233 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PRR33A8MZF0 331 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 FSCN2O14926 492 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 HOXA2O43364 376 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DCXO43602 365 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SLC37A4O43826 429 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CDKL5O76039 1030 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 LAG3P18627 525 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NRIP1P48552 1158 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NDUFV1P49821 464 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PLCB3Q01970 1234 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 COASYQ13057 564 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NONOQ15233 471 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 INF2Q27J81 1249 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SPOUT1Q5T280 376 aaKnown RBP10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PPP4R3AQ6IN85 833 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PDE12Q6L8Q7 609 aaKnown RBP10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 LRRC55Q6ZSA7 311 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ZNF598Q86UK7 904 aaKnown RBP10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ECHDC2Q86YB7 292 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 LRRC43Q8N309 656 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CASD1Q96PB1 797 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PHF20Q9BVI0 1012 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DDX25Q9UHL0 483 aaKnown RBP10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 VAV3Q9UKW4 847 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 KCNJ14Q9UNX9 436 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 LZTS1Q9Y250 596 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 HCN4Q9Y3Q4 1203 aa10.58□□□□□ -0.72
CDC42-IT1-201ENST00000431803 FSD2A1L4K1 749 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PFKFB2O60825 505 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ZSCAN20P17040 1043 aaPredicted RBP10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ATF7P17544 494 aaPredicted RBP10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ERVFC1P60507 584 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CDC42EP1Q00587 391 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PPP2R5CQ13362 524 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 MTERF2Q49AM1 385 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CLLU1OSQ5K130 101 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 BLOC1S3Q6QNY0 202 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ANO5Q75V66 913 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 THNSL1Q8IYQ7 743 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 VN1R2Q8NFZ6 395 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ZNF668Q96K58 619 aaPredicted RBP10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CDCA3Q99618 268 aaPredicted RBP10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TRAIPQ9BWF2 469 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TLE6Q9H808 572 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 BARX2Q9UMQ3 279 aaPredicted RBP10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PIEZO1Q92508 2521 aa10.57□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CCDC194A0A1B0GVG4 234 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 EML1O00423 815 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PER2O15055 1255 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 MAFO75444 373 aaPredicted RBP10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CSDE1O75534 798 aaKnown RBP10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CTDNEP1O95476 244 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 EOMESO95936 686 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 GCFC2P16383 781 aaKnown RBP10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 FGFR4P22455 802 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PPM1AP35813 382 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ANAPC15P60006 121 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PSMC5P62195 406 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 KCNC3Q14003 757 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DUSP6Q16828 381 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 LETM2Q2VYF4 491 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 KCNT2Q6UVM3 1135 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TMEM184AQ6ZMB5 413 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NEK8Q86SG6 692 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ZNF410Q86VK4 478 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ABI1Q8IZP0 508 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 RDH13Q8NBN7 331 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 MICAL1Q8TDZ2 1067 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 MRPS27Q92552 414 aaKnown RBP10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 FAM122AQ96E09 287 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 FAM20AQ96MK3 541 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SCLT1Q96NL6 688 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SH2D3AQ9BRG2 576 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 GCOM2Q9BZD3 368 aaPredicted RBP10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SLKQ9H2G2 1235 aaPredicted RBP10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CHST12Q9NRB3 414 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms