RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 GCNAQ96QF7 691 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 PRMT7Q9NVM4 692 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-207ENST00000429896 MTUS1Q9ULD2 1270 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 UPP2O95045 317 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 AP3M2P53677 418 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 MFSD10Q14728 455 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 ZNF699Q32M78 642 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 C7orf25Q9BPX7 421 aa13.95□□□□□ -0.18
PTCH1-207ENST00000429896 RBAKQ9NYW8 714 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-207ENST00000429896 E7EVH7 732 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 ITGA4P13612 1032 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 SCP2P22307 547 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 NLRP11P59045 1033 aaKnown RBP13.94□□□□□ -0.18
PTCH1-207ENST00000429896 TSPY1Q01534 308 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 H3BRB1 525 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 GPR182O15218 404 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 PRCPP42785 496 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 CD99L2Q8TCZ2 262 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 TRIM9Q9C026 710 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 TUT1Q9H6E5 874 aaKnown RBP13.94□□□□□ -0.18
PTCH1-207ENST00000429896 PCDHB7Q9Y5E2 793 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 ADKP55263 362 aaKnown RBP13.94□□□□□ -0.18
PTCH1-207ENST00000429896 SYT10Q6XYQ8 523 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 ELMOD1Q8N336 334 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 GUF1Q8N442 669 aaKnown RBP13.94□□□□□ -0.18
PTCH1-207ENST00000429896 SECISBP2LQ93073 1101 aaKnown RBP13.94□□□□□ -0.18
PTCH1-207ENST00000429896 SAMSN1Q9NSI8 373 aaKnown RBP13.94□□□□□ -0.18
PTCH1-207ENST00000429896 NRAPQ86VF7 1730 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 CABYRO75952 493 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 SYCE1Q8N0S2 351 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 ZNF384Q8TF68 577 aa13.94□□□□□ -0.18
PTCH1-207ENST00000429896 MICALL1Q8N3F8 863 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 NDST4Q9H3R1 872 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 BZW2Q9Y6E2 419 aaKnown RBP13.93□□□□□ -0.18
PTCH1-207ENST00000429896 ZNF500O60304 480 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-207ENST00000429896 VAMP7P51809 220 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 KCNB1Q14721 858 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 TCP11X2Q5H9J9 407 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 IFNL1Q8IU54 200 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 THSD7AQ9UPZ6 1657 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 CA12O43570 354 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
PTCH1-207ENST00000429896 FLT3LGP49771 235 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 ATF7IP2Q5U623 682 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 ZNF560Q96MR9 790 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 TRIM31Q9BZY9 425 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-207ENST00000429896 CYP11B2P19099 503 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 IGSF9BQ9UPX0 1349 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 CYP3A4P08684 503 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 NSMCE1Q8WV22 266 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 IFIH1Q9BYX4 1025 aaKnown RBP13.93□□□□□ -0.18
PTCH1-207ENST00000429896 CALCOCO1Q9P1Z2 691 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 PPME1Q9Y570 386 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 ABCB4P21439 1286 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 PPP1R2P3Q6NXS1 205 aa13.93□□□□□ -0.18
PTCH1-207ENST00000429896 NSRP1Q9H0G5 558 aaKnown RBP13.93□□□□□ -0.18
PTCH1-207ENST00000429896 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-207ENST00000429896 PQBP1O60828 265 aaKnown RBP13.92□□□□□ -0.18
PTCH1-207ENST00000429896 HPDP32754 393 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-207ENST00000429896 RSRC2Q7L4I2 434 aaKnown RBP13.92□□□□□ -0.18
PTCH1-207ENST00000429896 PSMB7Q99436 277 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 NAP1L3Q99457 506 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-207ENST00000429896 PIK3CDO00329 1044 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 STAG3L1P0CL83 205 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 HIRAP54198 1017 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-207ENST00000429896 PSMD6Q15008 389 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 GRIK4Q16099 956 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 FAM117BQ6P1L5 589 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 SMC6Q96SB8 1091 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 FAM86B1E9PN63 330 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 PDXKO00764 312 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 LRRN2O75325 713 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 FAM86B2P0C5J1 330 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 SKIP12755 728 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 KLRC1P26715 233 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 GCLMP48507 274 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 PSEN2P49810 448 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 PRAMEF19Q5SWL8 479 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 SCYL2Q6P3W7 929 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 SEPT8Q92599 483 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 C17orf75Q9HAS0 396 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 LRRC4Q9HBW1 653 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 HAUS2Q9NVX0 235 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 COL1A1P02452 1464 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-207ENST00000429896 MYMKA6NI61 221 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 PPFIA4O75335 1185 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 MED24O75448 989 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 HMGCRP04035 888 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 C4orf19Q8IY42 314 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 ATP8B4Q8TF62 1192 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 SLC5A5Q92911 643 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 SETD4Q9NVD3 440 aa13.92□□□□□ -0.18
PTCH1-207ENST00000429896 ARHGAP6O43182 974 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms