RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 COL6A2P12110 1019 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 PTPN2P17706 415 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 POLR2EP19388 210 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 DNM2P50570 870 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 YARSP54577 528 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 TUBA1BP68363 451 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 FXNQ16595 210 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 BTNL9Q6UXG8 535 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 ACAD11Q709F0 780 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 TUBA1AQ71U36 451 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 INTS8Q75QN2 995 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 VSIG1Q86XK7 387 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 UHMK1Q8TAS1 419 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 STARD8Q92502 1023 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 SKA1Q96BD8 255 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 DNAJC1Q96KC8 554 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 SLC39A3Q9BRY0 314 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 KRT82Q9NSB4 513 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 CLIC5Q9NZA1 410 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 TDRKHQ9Y2W6 561 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 CASZ1Q86V15 1759 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 H7C1D1 291 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 NCK2O43639 380 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 DDX58O95786 925 aaKnown RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 MSL3P1P0C860 447 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 ARHGEF6Q15052 776 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 IL23RQ5VWK5 629 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 C1orf228Q6PIY5 440 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 TMTC3Q6ZXV5 915 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 AACSQ86V21 672 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 SFR1Q86XK3 245 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 ECHDC2Q86YB7 292 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 DYDC2Q96IM9 177 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 DCAF5Q96JK2 942 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 STK33Q9BYT3 514 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 FHDC1Q9C0D6 1143 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 NEUROG2Q9H2A3 272 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 SSX2IPQ9Y2D8 614 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 TRIM17Q9Y577 477 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 NUP188Q5SRE5 1749 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 PDS5AQ29RF7 1337 aaKnown RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 TBKBP1A7MCY6 615 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 VILLO15195 856 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 TBX10O75333 385 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 PSMG1O95456 288 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 EEF1GP26641 437 aaKnown RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 PTPN4P29074 926 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 RFX5P48382 616 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 IFNAR2P48551 515 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 PFKPQ01813 784 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 MGAT5Q09328 741 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 SEPT7Q16181 437 aaKnown RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 ZNF423Q2M1K9 1284 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 ARL13BQ3SXY8 428 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 ILDR2Q71H61 639 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 RIC3Q7Z5B4 369 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 GRAMD1CQ8IYS0 662 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 SCFD2Q8WU76 684 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 HSPBAP1Q96EW2 488 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 NDEL1Q9GZM8 345 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 USP29Q9HBJ7 922 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 CNOT7Q9UIV1 285 aaKnown RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 FBXO2Q9UK22 296 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 TELO2Q9Y4R8 837 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 MYO5AQ9Y4I1 1855 aaKnown RBP9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 PAPPAQ13219 1627 aa9.5□□□□□ -0.89
CDC42BPA-206ENST00000429440 TJP1Q07157 1748 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 ABCA3Q99758 1704 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 A0A088AWK7 358 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 AP1G1O43747 822 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 PARNO95453 639 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 SRGNP10124 158 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 EPHB2P29323 1055 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 CRABP2P29373 138 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 TKTP29401 623 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 DSG1Q02413 1049 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 DPYDQ12882 1025 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 EIF2B5Q13144 721 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 HNRNPDQ14103 355 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 CABP7Q86V35 215 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 TTC30AQ86WT1 665 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 DDX42Q86XP3 938 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 EFHD2Q96C19 240 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 ANKRD36BP1Q96IX9 119 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 NSMCE3Q96MG7 304 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 PPP1R10Q96QC0 940 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 MYD88Q99836 296 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 HEPHQ9BQS7 1158 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 CTNND2Q9UQB3 1225 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 TNFRSF10AO00220 468 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 NDC80O14777 642 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 ADCY3O60266 1144 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 ADAM23O75077 832 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 SNRPA1P09661 255 aaKnown RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 POLGP54098 1239 aaPredicted RBP9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 CASP7P55210 303 aa9.49□□□□□ -0.89
CDC42BPA-206ENST00000429440 PAK1Q13153 545 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms