RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SIP14410 1827 aa10.28□□□□□ -0.76
RFX3-AS1-202ENST00000427722 EYSQ5T1H1 3165 aa10.28□□□□□ -0.76
RFX3-AS1-202ENST00000427722 MICAL3Q7RTP6 2002 aa10.28□□□□□ -0.76
RFX3-AS1-202ENST00000427722 GBF1Q92538 1859 aa10.27□□□□□ -0.76
RFX3-AS1-202ENST00000427722 PTPRSQ13332 1948 aa10.27□□□□□ -0.76
RFX3-AS1-202ENST00000427722 H3BNC9 293 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 GAS2O43903 313 aaKnown RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 USO1O60763 962 aaKnown RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MED24O75448 989 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SRGAP2CP0DJJ0 459 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 BMPR1AP36894 532 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MLLT3P42568 568 aaPredicted RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 RARRES1P49788 294 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TOB1P50616 345 aaPredicted RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CDC42EP1Q00587 391 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LAMTOR4Q0VGL1 99 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PTPROQ16827 1216 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TIGD5Q53EQ6 642 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 FAM102BQ5T8I3 360 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 FAM43BQ6ZT52 329 aaPredicted RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CATSPER4Q7RTX7 472 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 EXOC8Q8IYI6 725 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ERMNQ8TAM6 284 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TCP11Q8WWU5 503 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PRPF31Q8WWY3 499 aaKnown RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CLP1Q92989 425 aaKnown RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MRPL38Q96DV4 380 aaKnown RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TUFT1Q9NNX1 390 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 XPNPEP1Q9NQW7 623 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ANKEF1Q9NU02 776 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TMEM161AQ9NX61 479 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PIN4Q9Y237 131 aaKnown RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PCDHB6Q9Y5E3 794 aa10.27□□□□□ -0.77
RFX3-AS1-202ENST00000427722 COL4A4P53420 1690 aaPredicted RBP10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 C5orf67F2Z3F1 127 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 DLL1O00548 723 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 DGAT1O75907 488 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SPATA31C1P0DKV0 1188 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TFF2Q03403 129 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PTGDRQ13258 359 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SPOUT1Q5T280 376 aaKnown RBP10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 HAUS3Q68CZ6 603 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TWF2Q6IBS0 349 aaKnown RBP10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 FERMT3Q86UX7 667 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CATSPER3Q86XQ3 398 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ECHDC2Q86YB7 292 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ABI1Q8IZP0 508 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 RNF149Q8NC42 400 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ASAP3Q8TDY4 903 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 INO80BQ9C086 356 aaPredicted RBP10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 POLR3FQ9H1D9 316 aaPredicted RBP10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 DACT1Q9NYF0 836 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LMCD1Q9NZU5 365 aa10.26□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ARHGEF35A5YM69 484 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 GRM6O15303 877 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 HOXA2O43364 376 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 RB1P06400 928 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ATF7P17544 494 aaPredicted RBP10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CCT6AP40227 531 aaKnown RBP10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PHKA2P46019 1235 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 FAM189BP81408 668 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 RILPL1Q5EBL4 403 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TJAP1Q5JTD0 557 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LARP1BQ659C4 914 aaKnown RBP10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MAEAQ7L5Y9 396 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LRRC43Q8N309 656 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 C4orf32Q8N8J7 132 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SNX29Q8TEQ0 813 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 POLR3CQ9BUI4 534 aaPredicted RBP10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PLVAPQ9BX97 442 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TMEM117Q9H0C3 514 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ELAC1Q9H777 363 aaKnown RBP10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MINDY3Q9H8M7 445 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ALG13Q9NP73 1137 aaKnown RBP10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 GPRC5CQ9NQ84 441 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 AGPAT5Q9NUQ2 364 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 RNF19AQ9NV58 838 aa10.25□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PRUNE2Q8WUY3 3088 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 A0A0U1RQF3 1178 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 VPS37CA5D8V6 355 aaPredicted RBP10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PP2D1A8MPX8 630 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 INO80B-WBP1J3KQ70 363 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ERLIN2O94905 339 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ITGB1P05556 798 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 GLRA2P23416 452 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 RPA1P27694 616 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MRPS5P82675 430 aaKnown RBP10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CUL4AQ13619 759 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CAPSQ13938 189 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TFDP1Q14186 410 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MXD4Q14582 209 aaPredicted RBP10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LONRF3Q496Y0 759 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TCEAL5Q5H9L2 206 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CLLU1OSQ5K130 101 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SRGAP1Q7Z6B7 1085 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 KLHL23Q8NBE8 558 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms