RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ZNF598Q86UK7 904 aaKnown RBP16.51■□□□□ 0.23
RTN4-210ENST00000427710 HELQQ8TDG4 1101 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 FOXD4L4Q8WXT5 416 aaPredicted RBP16.51■□□□□ 0.23
RTN4-210ENST00000427710 CASD1Q96PB1 797 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 PNMA5Q96PV4 448 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 ELAC1Q9H777 363 aaKnown RBP16.51■□□□□ 0.23
RTN4-210ENST00000427710 ALG13Q9NP73 1137 aaKnown RBP16.51■□□□□ 0.23
RTN4-210ENST00000427710 AGPAT5Q9NUQ2 364 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 TYW1Q9NV66 732 aaKnown RBP16.51■□□□□ 0.23
RTN4-210ENST00000427710 DACT1Q9NYF0 836 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 CLIC4Q9Y696 253 aa16.51■□□□□ 0.23
RTN4-210ENST00000427710 A0A0U1RQF3 1178 aa16.5■□□□□ 0.23
RTN4-210ENST00000427710 LRRIQ4A6NIV6 560 aa16.5■□□□□ 0.23
RTN4-210ENST00000427710 INO80B-WBP1J3KQ70 363 aa16.5■□□□□ 0.23
RTN4-210ENST00000427710 CYP11B2P19099 503 aa16.5■□□□□ 0.23
RTN4-210ENST00000427710 HOXA11P31270 313 aaPredicted RBP16.5■□□□□ 0.23
RTN4-210ENST00000427710 TFDP1Q14186 410 aa16.5■□□□□ 0.23
RTN4-210ENST00000427710 CWH43Q9H720 699 aa16.5■□□□□ 0.23
RTN4-210ENST00000427710 CHST12Q9NRB3 414 aa16.5■□□□□ 0.23
RTN4-210ENST00000427710 C5orf67F2Z3F1 127 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 ITGB1P05556 798 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 MUTP22033 750 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 DNAJB1P25685 340 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 CEBPZQ03701 1054 aaKnown RBP16.49■□□□□ 0.23
RTN4-210ENST00000427710 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 UBXN11Q5T124 520 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 CDR2LQ86X02 465 aaPredicted RBP16.49■□□□□ 0.23
RTN4-210ENST00000427710 KLHL23Q8NBE8 558 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 MCPH1Q8NEM0 835 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 MRPL38Q96DV4 380 aaKnown RBP16.49■□□□□ 0.23
RTN4-210ENST00000427710 TMEM117Q9H0C3 514 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 FAM105AQ9NUU6 356 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 USP20Q9Y2K6 914 aa16.49■□□□□ 0.23
RTN4-210ENST00000427710 B4GALT5O43286 388 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 STX6O43752 255 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 TSPAN1O60635 241 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 ERLIN2O94905 339 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 EYA4O95677 639 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 RB1P06400 928 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 LIG1P18858 919 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 MARCKSP29966 332 aaPredicted RBP16.48■□□□□ 0.23
RTN4-210ENST00000427710 PBX3P40426 434 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 TFF2Q03403 129 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 AMHR2Q16671 573 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 ARL6IP4Q66PJ3 421 aaKnown RBP16.48■□□□□ 0.23
RTN4-210ENST00000427710 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
RTN4-210ENST00000427710 ABI1Q8IZP0 508 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 COLGALT1Q8NBJ5 622 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 C11orf84Q9BUA3 381 aaPredicted RBP16.48■□□□□ 0.23
RTN4-210ENST00000427710 KIFC3Q9BVG8 833 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 RUSC1Q9BVN2 902 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 EIF2AQ9BY44 585 aaKnown RBP16.48■□□□□ 0.23
RTN4-210ENST00000427710 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
RTN4-210ENST00000427710 LMCD1Q9NZU5 365 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 PLAGL2Q9UPG8 496 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 INPP5FQ9Y2H2 1132 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 RWDD3Q9Y3V2 267 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 PCDHB2Q9Y5E7 798 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 STK24Q9Y6E0 443 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 TCHHQ07283 1943 aa16.48■□□□□ 0.23
RTN4-210ENST00000427710 NCOR1O75376 2440 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 TTLL13PA6NNM8 815 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 EOMESO95936 686 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 SSBP05455 408 aaKnown RBP eCLIP16.47■□□□□ 0.23
RTN4-210ENST00000427710 PTPROQ16827 1216 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 TCEAL5Q5H9L2 206 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 SPECC1Q5M775 1068 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 FAM43BQ6ZT52 329 aaPredicted RBP16.47■□□□□ 0.23
RTN4-210ENST00000427710 CABP7Q86V35 215 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 SPPL3Q8TCT6 385 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 LRRC15Q8TF66 581 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 THEGQ9P2T0 379 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 PCDHGC5Q9Y5F6 944 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 CUL9Q8IWT3 2517 aa16.47■□□□□ 0.23
RTN4-210ENST00000427710 HOXA2O43364 376 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 EDN1P05305 212 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 ARF4P18085 180 aaPredicted RBP16.46■□□□□ 0.23
RTN4-210ENST00000427710 IRS1P35568 1242 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 AFF1P51825 1210 aaKnown RBP16.46■□□□□ 0.23
RTN4-210ENST00000427710 POU5F1BQ06416 359 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 RAD51AP2Q09MP3 1159 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 CAMK1Q14012 370 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 PTPAQ15257 358 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 RINT1Q6NUQ1 792 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 AGMOQ6ZNB7 445 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 POF1BQ8WVV4 589 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 CDK5RAP3Q96JB5 506 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 USP28Q96RU2 1077 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 TRAIPQ9BWF2 469 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 APOL6Q9BWW8 343 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 PLVAPQ9BX97 442 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 HES2Q9Y543 173 aa16.46■□□□□ 0.23
RTN4-210ENST00000427710 VCANP13611 3396 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 NPHP3-ACAD11A0A0J9YXS1 232 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 SFI1A8K8P3 1242 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 NT5C1B-RDH14C9J2C7 533 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 HIP1RO75146 1068 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 OFD1O75665 1012 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 NPTXRO95502 500 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms