RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 VPS52Q8N1B4 723 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
HDLBP-213ENST00000427007 BCL7CQ8WUZ0 217 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-213ENST00000427007 PHOX2BQ99453 314 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 PHF20Q9BVI0 1012 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 INO80BQ9C086 356 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-213ENST00000427007 GBP3Q9H0R5 595 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 ZBP1Q9H171 429 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 POMKQ9H5K3 350 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 NRDE2Q9H7Z3 1164 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 CYP26B1Q9NR63 512 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 GJB4Q9NTQ9 266 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 TBC1D13Q9NVG8 400 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 WRAP73Q9P2S5 460 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-213ENST00000427007 DNAJB4Q9UDY4 337 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 VAV3Q9UKW4 847 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 ZNF318Q5VUA4 2279 aa11.45□□□□□ -0.58
HDLBP-213ENST00000427007 EPB41L2O43491 1005 aaKnown RBP11.44□□□□□ -0.58
HDLBP-213ENST00000427007 CCNT1O60563 726 aaKnown RBP11.44□□□□□ -0.58
HDLBP-213ENST00000427007 QARSP47897 775 aaKnown RBP11.44□□□□□ -0.58
HDLBP-213ENST00000427007 POLGP54098 1239 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-213ENST00000427007 RNASELQ05823 741 aaKnown RBP11.44□□□□□ -0.58
HDLBP-213ENST00000427007 PPP2R5CQ13362 524 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 NOMO2Q5JPE7 1267 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 RARS2Q5T160 578 aaKnown RBP11.44□□□□□ -0.58
HDLBP-213ENST00000427007 CES5AQ6NT32 575 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 KANK3Q6NY19 840 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 GLB1LQ6UWU2 654 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 PIK3AP1Q6ZUJ8 805 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 NEK8Q86SG6 692 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 FBXL6Q8N531 539 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 C12orf76Q8N812 135 aaPredicted RBP11.44□□□□□ -0.58
HDLBP-213ENST00000427007 TMEM87AQ8NBN3 555 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 SLC7A3Q8WY07 619 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 TMEM143Q96AN5 459 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 ASIC4Q96FT7 647 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 CEP170P1Q96L14 293 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 TRAIPQ9BWF2 469 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 TM6SF1Q9BZW5 370 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 IFT122Q9HBG6 1241 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 KCNMB3Q9NPA1 279 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 COL4A3BPQ9Y5P4 624 aa11.44□□□□□ -0.58
HDLBP-213ENST00000427007 C2CD4DB7Z1M9 353 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 MARCH6O60337 910 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 B4GALT3O60512 393 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 OFD1O75665 1012 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 P4HBP07237 508 aaKnown RBP11.43□□□□□ -0.58
HDLBP-213ENST00000427007 GALTP07902 379 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 SRGAP2CP0DJJ0 459 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 CTSAP10619 480 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 SKIP12755 728 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 EPCAMP16422 314 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 SLC11A1P49279 550 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 RAB27AP51159 221 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 VCPP55072 806 aaKnown RBP11.43□□□□□ -0.58
HDLBP-213ENST00000427007 BMS1Q14692 1282 aaKnown RBP11.43□□□□□ -0.58
HDLBP-213ENST00000427007 NCAPH2Q6IBW4 605 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 AGMOQ6ZNB7 445 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 ZNF280BQ86YH2 543 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 FEZF2Q8TBJ5 459 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 PGBD4Q96DM1 585 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 IGSF21Q96ID5 467 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 JPH2Q9BR39 696 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-213ENST00000427007 LXNQ9BS40 222 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 ADAM7Q9H2U9 754 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 MINDY3Q9H8M7 445 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 AGPAT5Q9NUQ2 364 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 NR2E1Q9Y466 385 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 PCDHB2Q9Y5E7 798 aa11.43□□□□□ -0.58
HDLBP-213ENST00000427007 FAM205CA6NFA0 338 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 DKC1O60832 514 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 ZNF623O75123 536 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 CDKL5O76039 1030 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 DDHD2O94830 711 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 PDGFBP01127 241 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 SSBP05455 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 XBP1P17861 261 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 YWHABP31946 246 aaKnown RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 AFF1P51825 1210 aaKnown RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 PTPN5P54829 565 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 CYP4A11Q02928 519 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 ITIH3Q06033 890 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 CTTNQ14247 550 aaKnown RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 EARS2Q5JPH6 523 aaKnown RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 PPP4R3AQ6IN85 833 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 DDX53Q86TM3 631 aaKnown RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 FAM177A1Q8N128 213 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 KREMEN2Q8NCW0 462 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 URGCPQ8TCY9 931 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 PRPF31Q8WWY3 499 aaKnown RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 PSPC1Q8WXF1 523 aaKnown RBP11.42□□□□□ -0.58
HDLBP-213ENST00000427007 HAS1Q92839 578 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 DYDC2Q96IM9 177 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 FAM20AQ96MK3 541 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 NECTIN4Q96NY8 510 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 VN1R3Q9BXE9 311 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 SMOC2Q9H3U7 446 aa11.42□□□□□ -0.58
HDLBP-213ENST00000427007 DHX33Q9H6R0 707 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms