RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 SFNP31947 248 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 SLC11A1P49279 550 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 CLCN4P51793 760 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 DRP2Q13474 957 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 MTERF2Q49AM1 385 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 C15orf39Q6ZRI6 1047 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
PDAP1-202ENST00000426447 CATSPER4Q7RTX7 472 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 URGCPQ8TCY9 931 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 TRAIPQ9BWF2 469 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 MRPL17Q9NRX2 175 aaKnown RBP16.5■□□□□ 0.23
PDAP1-202ENST00000426447 WNT16Q9UBV4 365 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 SEPT9Q9UHD8 586 aaPredicted RBP16.5■□□□□ 0.23
PDAP1-202ENST00000426447 FAN1Q9Y2M0 1017 aa16.5■□□□□ 0.23
PDAP1-202ENST00000426447 CCDC196A0A1B0GTZ2 297 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 ESYT2A0FGR8 921 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 ADAMTS3O15072 1205 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 NARSO43776 548 aaKnown RBP16.49■□□□□ 0.23
PDAP1-202ENST00000426447 CIITAP33076 1130 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 ADD1P35611 737 aaKnown RBP16.49■□□□□ 0.23
PDAP1-202ENST00000426447 RAB27AP51159 221 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 JAK3P52333 1124 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 EXOSC10Q01780 885 aaKnown RBP16.49■□□□□ 0.23
PDAP1-202ENST00000426447 UGCGQ16739 394 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 ELMSAN1Q6PJG2 1045 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 ZNF280BQ86YH2 543 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 RHPN2Q8IUC4 686 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 RSAD2Q8WXG1 361 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 STAMQ92783 540 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 RIT2Q99578 217 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 HINFPQ9BQA5 517 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 TEKT3Q9BXF9 490 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 FAM217BQ9NTX9 383 aaPredicted RBP16.49■□□□□ 0.23
PDAP1-202ENST00000426447 SUCLA2Q9P2R7 463 aaPredicted RBP16.49■□□□□ 0.23
PDAP1-202ENST00000426447 DPP7Q9UHL4 492 aa16.49■□□□□ 0.23
PDAP1-202ENST00000426447 CCDC195A0A1B0GUA6 201 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 MEIS3P2A8K0S8 358 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 C2CD2LO14523 706 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 MSH4O15457 936 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 ZNF623O75123 536 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 AK2P54819 239 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 AKAP17AQ02040 695 aaKnown RBP16.48■□□□□ 0.23
PDAP1-202ENST00000426447 TARBP2Q15633 366 aaKnown RBP16.48■□□□□ 0.23
PDAP1-202ENST00000426447 XKR3Q5GH77 459 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 LRCH2Q5VUJ6 765 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 DGLUCYQ7Z3D6 616 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 ZNF410Q86VK4 478 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 KIAA2013Q8IYS2 634 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 RIN2Q8WYP3 895 aaPredicted RBP16.48■□□□□ 0.23
PDAP1-202ENST00000426447 SH2D3AQ9BRG2 576 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 VN1R3Q9BXE9 311 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 NIFKQ9BYG3 293 aaKnown RBP16.48■□□□□ 0.23
PDAP1-202ENST00000426447 UNC45AQ9H3U1 944 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 KANSL3Q9P2N6 904 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 CA14Q9ULX7 337 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 SSX2IPQ9Y2D8 614 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 R4GN57 208 aa16.48■□□□□ 0.23
PDAP1-202ENST00000426447 DDX11L8A8MPP1 907 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 MYBP10242 640 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 SPECC1Q5M775 1068 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 MIER3Q7Z3K6 550 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 LENG9Q96B70 501 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 RMDN1Q96DB5 314 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 NLRP4Q96MN2 994 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 MAN1C1Q9NR34 630 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 RIF1Q5UIP0 2472 aaKnown RBP16.47■□□□□ 0.23
PDAP1-202ENST00000426447 SPTBN4Q9H254 2564 aa16.47■□□□□ 0.23
PDAP1-202ENST00000426447 KRBA1A5PL33 1030 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 NRP1O14786 923 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 DDHD2O94830 711 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 URODP06132 367 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 USP11P51784 963 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 ZC3H14Q6PJT7 736 aaKnown RBP16.46■□□□□ 0.23
PDAP1-202ENST00000426447 KSR1Q8IVT5 923 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 SLC44A3Q8N4M1 653 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 GJA10Q969M2 543 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 YTHDC1Q96MU7 727 aaKnown RBP16.46■□□□□ 0.23
PDAP1-202ENST00000426447 TMEM175Q9BSA9 504 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 RSAD1Q9HA92 442 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 PIDD1Q9HB75 910 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 WDR6Q9NNW5 1121 aaKnown RBP16.46■□□□□ 0.23
PDAP1-202ENST00000426447 DMDP11532 3685 aa16.46■□□□□ 0.23
PDAP1-202ENST00000426447 MYH9P35579 1960 aaKnown RBP16.46■□□□□ 0.22
PDAP1-202ENST00000426447 FAM186AA6NE01 2351 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 IGKV6-21A0A0C4DH24 114 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 TMEM150BA6NC51 233 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 PRPF3O43395 683 aaKnown RBP16.45■□□□□ 0.22
PDAP1-202ENST00000426447 LILRB3O75022 631 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 N4BP1O75113 896 aaKnown RBP16.45■□□□□ 0.22
PDAP1-202ENST00000426447 POMCP01189 267 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 ADH1AP07327 375 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 RCAN1P53805 252 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 AGMOQ6ZNB7 445 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 CMASQ8NFW8 434 aaPredicted RBP16.45■□□□□ 0.22
PDAP1-202ENST00000426447 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
PDAP1-202ENST00000426447 SLC5A5Q92911 643 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms