RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 GLE1Q53GS7 698 aaKnown RBP17.22■□□□□ 0.35
PKP4-205ENST00000426248 RAPGEF5Q92565 580 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 SGIP1Q9BQI5 828 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 NSRP1Q9H0G5 558 aaKnown RBP17.22■□□□□ 0.35
PKP4-205ENST00000426248 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 ACTN4O43707 911 aaKnown RBP17.22■□□□□ 0.35
PKP4-205ENST00000426248 PEX10O60683 326 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 GLI1P08151 1106 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 PPP2R2AP63151 447 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 CCDC38Q502W7 563 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 TCP11X2Q5H9J9 407 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 TNFRSF25Q93038 417 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 TATDN2Q93075 761 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 ACAD9Q9H845 621 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 AGPAT5Q9NUQ2 364 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 ABT1Q9ULW3 272 aaKnown RBP17.22■□□□□ 0.35
PKP4-205ENST00000426248 CCDC169A6NNP5 214 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 GCNT3O95395 438 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 FGFR1OPO95684 399 aaKnown RBP17.21■□□□□ 0.35
PKP4-205ENST00000426248 DPH5Q9H2P9 285 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 REXO2Q9Y3B8 237 aaKnown RBP17.21■□□□□ 0.35
PKP4-205ENST00000426248 CAPN6Q9Y6Q1 641 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 ANO9A1A5B4 782 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 ATP2A2P16615 1042 aaKnown RBP17.21■□□□□ 0.35
PKP4-205ENST00000426248 ERO1BQ86YB8 467 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 DDX12PQ92771 950 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 PURBQ96QR8 312 aaKnown RBP17.21■□□□□ 0.35
PKP4-205ENST00000426248 BICDL2A1A5D9 508 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 CCT8L1PA6NM43 557 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 PRPF4BQ13523 1007 aaKnown RBP17.21■□□□□ 0.35
PKP4-205ENST00000426248 SLMAPQ14BN4 828 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 EZH1Q92800 747 aaPredicted RBP17.21■□□□□ 0.35
PKP4-205ENST00000426248 WDR11Q9BZH6 1224 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 PACSIN2Q9UNF0 486 aaPredicted RBP17.21■□□□□ 0.35
PKP4-205ENST00000426248 PPP2R3BQ9Y5P8 575 aa17.21■□□□□ 0.35
PKP4-205ENST00000426248 MEIS2O14770 477 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 INHBEP58166 350 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 EHHADHQ08426 723 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 CUL3Q13618 768 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 FAM26FQ5R3K3 315 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 OPTNQ96CV9 577 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 IFT74Q96LB3 600 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 ATXN2Q99700 1313 aaKnown RBP17.2■□□□□ 0.34
PKP4-205ENST00000426248 XKR9Q5GH70 373 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 MMGT1Q8N4V1 131 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
PKP4-205ENST00000426248 GLG1Q92896 1179 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 CHMP6Q96FZ7 201 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 FAM20AQ96MK3 541 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 TEPSINQ96N21 525 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 NOX5Q96PH1 765 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 CCSER1Q9C0I3 900 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 NID2Q14112 1375 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 EPB41P11171 864 aaKnown RBP17.2■□□□□ 0.34
PKP4-205ENST00000426248 ATP4AP20648 1035 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 DYDC2Q96IM9 177 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
PKP4-205ENST00000426248 STK17AQ9UEE5 414 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 PDE4DIPQ5VU43 2346 aa17.2■□□□□ 0.34
PKP4-205ENST00000426248 RCCD1A6NED2 376 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 MMEP08473 750 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 USP50Q70EL3 339 aaPredicted RBP17.19■□□□□ 0.34
PKP4-205ENST00000426248 DDX42Q86XP3 938 aaKnown RBP eCLIP17.19■□□□□ 0.34
PKP4-205ENST00000426248 KLHL23Q8NBE8 558 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 BICD1Q96G01 975 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 CUEDC2Q9H467 287 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 VWA5AO00534 786 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 CNGA1P29973 690 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 CCND2P30279 289 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 GBP1P32455 592 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 RASIP1Q5U651 963 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 RNF10Q8N5U6 811 aaKnown RBP17.19■□□□□ 0.34
PKP4-205ENST00000426248 NOC4LQ9BVI4 516 aaKnown RBP17.19■□□□□ 0.34
PKP4-205ENST00000426248 VCXQ9H320 206 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 ANKRD31Q8N7Z5 1873 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 CEP104O60308 925 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 FERP16591 822 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 HUNKP57058 714 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 STXBP4Q6ZWJ1 553 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 DPP9Q86TI2 863 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 FAM114A1Q8IWE2 563 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 MED15Q96RN5 788 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 FAM86B1E9PN63 330 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 FAM86B2P0C5J1 330 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 IL17AQ16552 155 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 ECT2Q9H8V3 914 aa17.19■□□□□ 0.34
PKP4-205ENST00000426248 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.343e-6■■■□□ 18.9
PKP4-205ENST00000426248 MSH4O15457 936 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 TSNAXIP1Q2TAA8 658 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 ARHGAP22Q7Z5H3 698 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 ERICH1Q86X53 443 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 NUDT12Q9BQG2 462 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 GINM1Q9NU53 330 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 PFDN1O60925 122 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 USP2O75604 605 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms