RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 SUCLA2Q9P2R7 463 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-209ENST00000425239 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
ATG4B-209ENST00000425239 SEPT9Q9UHD8 586 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-209ENST00000425239 VAV3Q9UKW4 847 aa16.84■□□□□ 0.29
ATG4B-209ENST00000425239 SLC37A4O43826 429 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 WEE2P0C1S8 567 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 EPCAMP16422 314 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 POLGP54098 1239 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-209ENST00000425239 LONRF3Q496Y0 759 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 AGMOQ6ZNB7 445 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 MRPL10Q7Z7H8 261 aaKnown RBP16.83■□□□□ 0.28
ATG4B-209ENST00000425239 ZNF280BQ86YH2 543 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 RHPN2Q8IUC4 686 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 RSPH1Q8WYR4 309 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 NECTIN4Q96NY8 510 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 LARP6Q9BRS8 491 aaKnown RBP16.83■□□□□ 0.28
ATG4B-209ENST00000425239 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 ZFHX2Q9C0A1 2572 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-209ENST00000425239 MINDY3Q9H8M7 445 aa16.83■□□□□ 0.28
ATG4B-209ENST00000425239 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 DDHD2O94830 711 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 DEXIO95424 95 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 EFEMP2O95967 443 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 NPEPPSP55786 919 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 PSMC5P62195 406 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
ATG4B-209ENST00000425239 PPP2R5CQ13362 524 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 NOMO2Q5JPE7 1267 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 UBXN11Q5T124 520 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 FAM177A1Q8N128 213 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-209ENST00000425239 TMEM169Q96HH4 297 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 SCLT1Q96NL6 688 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 CYP26B1Q9NR63 512 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 SORCS3Q9UPU3 1222 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 NR2E1Q9Y466 385 aa16.82■□□□□ 0.28
ATG4B-209ENST00000425239 EPB41L2O43491 1005 aaKnown RBP16.81■□□□□ 0.28
ATG4B-209ENST00000425239 ZC3H11AO75152 810 aaKnown RBP eCLIP16.81■□□□□ 0.28
ATG4B-209ENST00000425239 SFPQP23246 707 aaKnown RBP eCLIP16.81■□□□□ 0.28
ATG4B-209ENST00000425239 SLC11A1P49279 550 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 DNM2P50570 870 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 PTPN14Q15678 1187 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 INF2Q27J81 1249 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 PLA2G4FQ68DD2 849 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 TWF2Q6IBS0 349 aaKnown RBP16.81■□□□□ 0.28
ATG4B-209ENST00000425239 GALNT17Q6IS24 598 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 KIAA1841Q6NSI8 718 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 CES5AQ6NT32 575 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 UBALD2Q8IYN6 164 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 ZDHHC14Q8IZN3 488 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 HAS1Q92839 578 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 INO80BQ9C086 356 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-209ENST00000425239 DHX33Q9H6R0 707 aaKnown RBP16.81■□□□□ 0.28
ATG4B-209ENST00000425239 AGPAT5Q9NUQ2 364 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 PIN4Q9Y237 131 aaKnown RBP16.81■□□□□ 0.28
ATG4B-209ENST00000425239 PLXNA3P51805 1871 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 DENND4AQ7Z401 1863 aa16.81■□□□□ 0.28
ATG4B-209ENST00000425239 ASGR2P07307 311 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 SKIP12755 728 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 MTHFRP42898 656 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 NUBP1P53384 320 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 SPIRE1Q08AE8 756 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 RARS2Q5T160 578 aaKnown RBP16.8■□□□□ 0.28
ATG4B-209ENST00000425239 PPP4R3AQ6IN85 833 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 GLB1LQ6UWU2 654 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 TRIM22Q8IYM9 498 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 PRPF31Q8WWY3 499 aaKnown RBP16.8■□□□□ 0.28
ATG4B-209ENST00000425239 PHF20Q9BVI0 1012 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 TM6SF1Q9BZW5 370 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 FAM86C1Q9NVL1 165 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 DDX25Q9UHL0 483 aaKnown RBP16.8■□□□□ 0.28
ATG4B-209ENST00000425239 KCNJ14Q9UNX9 436 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 USTQ9Y2C2 406 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 PCDHB2Q9Y5E7 798 aa16.8■□□□□ 0.28
ATG4B-209ENST00000425239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-209ENST00000425239 ZBTB39O15060 712 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 QARSP47897 775 aaKnown RBP16.79■□□□□ 0.28
ATG4B-209ENST00000425239 RAB27AP51159 221 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 MTMR3Q13615 1198 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 GIT2Q14161 759 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 NONOQ15233 471 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■■■□□ 14.8
ATG4B-209ENST00000425239 CATSPER4Q7RTX7 472 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 TMEM105Q8N8V8 129 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 NLRP4Q96MN2 994 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 DZANK1Q9NVP4 752 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 LIMD1Q9UGP4 676 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 COL4A3BPQ9Y5P4 624 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 WDR87Q6ZQQ6 2873 aa16.79■□□□□ 0.28
ATG4B-209ENST00000425239 CARNS1A5YM72 827 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 PROB1E7EW31 1015 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 H0Y858 1186 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 REC8O95072 547 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 P4HBP07237 508 aaKnown RBP16.78■□□□□ 0.28
ATG4B-209ENST00000425239 CNPP09543 421 aaKnown RBP16.78■□□□□ 0.28
ATG4B-209ENST00000425239 CLCN4P51793 760 aa16.78■□□□□ 0.28
ATG4B-209ENST00000425239 EARS2Q5JPH6 523 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms