RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 ZBTB39O15060 712 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 IL9P15248 144 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 ATF7P17544 494 aaPredicted RBP18.45■□□□□ 0.54
SHANK2-207ENST00000425049 NRIP1P48552 1158 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 TRAPPC10P48553 1259 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 NCBP1Q09161 790 aaKnown RBP18.45■□□□□ 0.54
SHANK2-207ENST00000425049 ZNF174Q15697 407 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 KCNT2Q6UVM3 1135 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 MRPS27Q92552 414 aaKnown RBP18.45■□□□□ 0.54
SHANK2-207ENST00000425049 PGBD4Q96DM1 585 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 TLE6Q9H808 572 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 ENTPD7Q9NQZ7 604 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 SPG21Q9NZD8 308 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 LZTS1Q9Y250 596 aa18.45■□□□□ 0.54
SHANK2-207ENST00000425049 MUC3AQ02505 3323 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 BDP1A6H8Y1 2624 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 CARNS1A5YM72 827 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 SRGAP2BP0DMP2 458 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 GTF2F1P35269 517 aaKnown RBP eCLIP18.44■□□□□ 0.546e-7■■■■□ 23
SHANK2-207ENST00000425049 TECP42680 631 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 PLCB3Q01970 1234 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 RNASELQ05823 741 aaKnown RBP18.44■□□□□ 0.54
SHANK2-207ENST00000425049 CLUL1Q15846 466 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 CTC1Q2NKJ3 1217 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 LRRC55Q6ZSA7 311 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 ADGRD2Q7Z7M1 963 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 RBM23Q86U06 439 aaKnown RBP18.44■□□□□ 0.54
SHANK2-207ENST00000425049 EFHBQ8N7U6 833 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 TUFT1Q9NNX1 390 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 INPP5FQ9Y2H2 1132 aa18.44■□□□□ 0.54
SHANK2-207ENST00000425049 INO80B-WBP1J3KQ70 363 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 USO1O60763 962 aaKnown RBP18.43■□□□□ 0.54
SHANK2-207ENST00000425049 TBX10O75333 385 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 PBX3P40426 434 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 ALDH7A1P49419 539 aaKnown RBP18.43■□□□□ 0.54
SHANK2-207ENST00000425049 RARRES1P49788 294 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 BMS1Q14692 1282 aaKnown RBP18.43■□□□□ 0.54
SHANK2-207ENST00000425049 PCBP1Q15365 356 aaKnown RBP eCLIP18.43■□□□□ 0.54
SHANK2-207ENST00000425049 LONRF3Q496Y0 759 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 PLPP4Q5VZY2 271 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 HAUS3Q68CZ6 603 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 FAM178BQ8IXR5 827 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 URGCPQ8TCY9 931 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 PIGOQ8TEQ8 1089 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 LPPQ93052 612 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 TCF25Q9BQ70 676 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 XPNPEP1Q9NQW7 623 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 CD207Q9UJ71 328 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 PCDHB2Q9Y5E7 798 aa18.43■□□□□ 0.54
SHANK2-207ENST00000425049 LINC01565O15544 149 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 ZNF623O75123 536 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 ZC3H11AO75152 810 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHANK2-207ENST00000425049 XRCC6P12956 609 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHANK2-207ENST00000425049 LTBRP36941 435 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 ADAM15Q13444 863 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 SMAD4Q13485 552 aaKnown RBP18.42■□□□□ 0.54
SHANK2-207ENST00000425049 NOMO2Q5JPE7 1267 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 GJD3Q8N144 294 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 MCPH1Q8NEM0 835 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 TMEM169Q96HH4 297 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 NACC1Q96RE7 527 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 CDCA3Q99618 268 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-207ENST00000425049 C1QTNF1Q9BXJ1 281 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 RAB34Q9BZG1 259 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 POLR3FQ9H1D9 316 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-207ENST00000425049 MINDY3Q9H8M7 445 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 NGRNQ9NPE2 291 aaKnown RBP18.42■□□□□ 0.54
SHANK2-207ENST00000425049 PCDHGC5Q9Y5F6 944 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 ATG2AQ2TAZ0 1938 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 ARID2Q68CP9 1835 aa18.42■□□□□ 0.54
SHANK2-207ENST00000425049 CA8P35219 290 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 PTENP60484 403 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 DLX2Q07687 328 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-207ENST00000425049 NOTUMQ6P988 496 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 TMC7Q7Z402 723 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 SLC39A11Q8N1S5 342 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 CCDC51Q96ER9 411 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 POP1Q99575 1024 aaKnown RBP18.41■□□□□ 0.54
SHANK2-207ENST00000425049 POLR3CQ9BUI4 534 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-207ENST00000425049 PRKAG3Q9UGI9 489 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 CNTNAP2Q9UHC6 1331 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 PLXNA4Q9HCM2 1894 aa18.41■□□□□ 0.54
SHANK2-207ENST00000425049 ARHGEF35A5YM69 484 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 FSCN2O14926 492 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 PER2O15055 1255 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 AXLP30530 894 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 MCM2P49736 904 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 BCAR1P56945 870 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 ERVFC1P60507 584 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 CAPSQ13938 189 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 MCTP1Q6DN14 999 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 POTEGQ6S5H5 508 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 MAEAQ7L5Y9 396 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 CATSPER3Q86XQ3 398 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 HACE1Q8IYU2 909 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 TMEM87AQ8NBN3 555 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 CNNM3Q8NE01 707 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 ASAP3Q8TDY4 903 aa18.4■□□□□ 0.54
SHANK2-207ENST00000425049 FAM193BQ96PV7 902 aaPredicted RBP18.4■□□□□ 0.54
SHANK2-207ENST00000425049 TRIM6Q9C030 488 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms