RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CACNB2Q08289 660 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 PPFIA1Q13136 1202 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 SEPT7Q16181 437 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 PRSS53Q2L4Q9 553 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 TTC31Q49AM3 519 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 ATP13A4Q4VNC1 1196 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 FAM209AQ5JX71 171 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 MBLAC2Q68D91 279 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 RETSATQ6NUM9 610 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 UBE2R2Q712K3 238 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 FASTKD5Q7L8L6 764 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 SLC41A1Q8IVJ1 513 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 SMARCC2Q8TAQ2 1214 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 PLEKHO2Q8TD55 490 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 HDAC2Q92769 488 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 NELL1Q92832 810 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 ATP6V1E2Q96A05 226 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 HSPBAP1Q96EW2 488 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 CCDC34Q96HJ3 373 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 LRGUKQ96M69 825 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 CCDC138Q96M89 665 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 AARSD1Q9BTE6 412 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 CRB3Q9BUF7 120 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 LSM14BQ9BX40 385 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 NAA15Q9BXJ9 866 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 AP5M1Q9H0R1 490 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 NKX2-4Q9H2Z4 354 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 TSPY26PQ9H489 355 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 FAM204AQ9H8W3 233 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 ATP6V0A4Q9HBG4 840 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 ALG13Q9NP73 1137 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 USP40Q9NVE5 1235 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 BTG4Q9NY30 223 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 MARCH2Q9P0N8 246 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 TMCC3Q9ULS5 477 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 SIT1Q9Y3P8 196 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 MRFAP1Q9Y605 127 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 TRIM75PA6NK02 468 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 B4E1Z4 1266 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 ARNTLO00327 626 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 PLOD3O60568 738 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 IL33O95760 270 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 ZBED1O96006 694 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CPP00450 1065 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CFBP00751 764 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 APPP05067 770 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 HOXC13P31276 330 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 ADD2P35612 726 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CHKAP35790 457 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 UBA7P41226 1012 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 GRIA2P42262 883 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 MMP14P50281 582 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 SCNN1BP51168 640 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 NAP1L1P55209 391 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 MPP1Q00013 466 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CYP4F3Q08477 520 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 IFIT5Q13325 482 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 DCTN1Q14203 1278 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 SMC1AQ14683 1233 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 SART3Q15020 963 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CCDC158Q5M9N0 1113 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 NT5DC1Q5TFE4 455 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 AGAP9Q5VTM2 703 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 IQCEQ6IPM2 695 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 PRRT2Q7Z6L0 340 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 TBC1D1Q86TI0 1168 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 C11orf74Q86VG3 221 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 ANKRD13BQ86YJ7 626 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 COLGALT2Q8IYK4 626 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CMTR2Q8IYT2 770 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CARFQ8N187 725 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CBARPQ8N350 705 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 FAM26EQ8N5C1 309 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 ARL6IP6Q8N6S5 226 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 NPLOC4Q8TAT6 608 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 DEPTORQ8TB45 409 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 TBC1D20Q96BZ9 403 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 MRGPRX3Q96LB0 322 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 NOX5Q96PH1 765 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 SEC62Q99442 399 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 BDH2Q9BUT1 245 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 SLC26A6Q9BXS9 759 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 WDR12Q9GZL7 423 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 PRKRIP1Q9H875 184 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 TRIM39Q9HCM9 518 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 CYP26B1Q9NR63 512 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 ARHGEF4Q9NR80 690 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 NKIRAS2Q9NYR9 191 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 NTMQ9P121 344 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 TMEFF2Q9UIK5 374 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 GPR52Q9Y2T5 361 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 TMEM98Q9Y2Y6 226 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 TMX2Q9Y320 296 aa4.3□□□□□ -1.72
SF3B1-205ENST00000424674 TNPO3Q9Y5L0 923 aaKnown RBP4.3□□□□□ -1.72
SF3B1-205ENST00000424674 SYNRGQ9UMZ2 1314 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 SMTNL1A8MU46 457 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 M0R3H8 397 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 TOR1BO14657 336 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 TPP1O14773 563 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms