RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 LXNQ9BS40 222 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 S1PR5Q9H228 398 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 ZSWIM4Q9H7M6 989 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 MINDY3Q9H8M7 445 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 SPG21Q9NZD8 308 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.48
DDR1-234ENST00000424544 COL4A3BPQ9Y5P4 624 aa18.08■□□□□ 0.48
DDR1-234ENST00000424544 HIDE1A8MVS5 230 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 WNT7AO00755 349 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 DCXO43602 365 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 PPM1AP35813 382 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 PBX3P40426 434 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 RFC5P40937 340 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 CBX2Q14781 532 aaPredicted RBP18.07■□□□□ 0.48
DDR1-234ENST00000424544 MRPL10Q7Z7H8 261 aaKnown RBP18.07■□□□□ 0.48
DDR1-234ENST00000424544 ABI1Q8IZP0 508 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 MRPL43Q8N983 215 aaKnown RBP18.07■□□□□ 0.48
DDR1-234ENST00000424544 SLC7A3Q8WY07 619 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 SCLT1Q96NL6 688 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 MTMR9Q96QG7 549 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 POP1Q99575 1024 aaKnown RBP18.07■□□□□ 0.48
DDR1-234ENST00000424544 FAM105AQ9NUU6 356 aa18.07■□□□□ 0.48
DDR1-234ENST00000424544 BARX2Q9UMQ3 279 aaPredicted RBP18.07■□□□□ 0.48
DDR1-234ENST00000424544 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 FAM86C2PA6NEL3 165 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 MEIS3P2A8K0S8 358 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 LOC730098B7Z3J9 87 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 ASAP2O43150 1006 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 JAK2O60674 1132 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 OFD1O75665 1012 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 SKIP12755 728 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 KRT17Q04695 432 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 LAMTOR4Q0VGL1 99 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 HERC4Q5GLZ8 1057 aaPredicted RBP18.06■□□□□ 0.48
DDR1-234ENST00000424544 OTUD6AQ7L8S5 288 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 SRGAP1Q7Z6B7 1085 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 RNF169Q8NCN4 708 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 TMEM143Q96AN5 459 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 DYDC2Q96IM9 177 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 TCF25Q9BQ70 676 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 XPNPEP1Q9NQW7 623 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 AGPAT5Q9NUQ2 364 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 PCDHA12Q9UN75 941 aa18.06■□□□□ 0.48
DDR1-234ENST00000424544 BAG4O95429 457 aaKnown RBP18.05■□□□□ 0.48
DDR1-234ENST00000424544 BCAR1P56945 870 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 CTTNQ14247 550 aaKnown RBP18.05■□□□□ 0.48
DDR1-234ENST00000424544 UBXN11Q5T124 520 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 SYCE2Q6PIF2 218 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 AGMOQ6ZNB7 445 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 CATSPER4Q7RTX7 472 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 FERMT3Q86UX7 667 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 IFNLR1Q8IU57 520 aaPredicted RBP18.05■□□□□ 0.48
DDR1-234ENST00000424544 RNF135Q8IUD6 432 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 PSPC1Q8WXF1 523 aaKnown RBP18.05■□□□□ 0.48
DDR1-234ENST00000424544 LPPQ93052 612 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 NLRP4Q96MN2 994 aa18.05■□□□□ 0.48
DDR1-234ENST00000424544 MRPL9Q9BYD2 267 aaKnown RBP18.05■□□□□ 0.48
DDR1-234ENST00000424544 PIN4Q9Y237 131 aaKnown RBP18.05■□□□□ 0.48
DDR1-234ENST00000424544 USP15Q9Y4E8 981 aaPredicted RBP18.05■□□□□ 0.48
DDR1-234ENST00000424544 C2orf71A6NGG8 1288 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 GAS2O43903 313 aaKnown RBP18.04■□□□□ 0.48
DDR1-234ENST00000424544 GALTP07902 379 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 SRGAP2CP0DJJ0 459 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 XRCC6P12956 609 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDR1-234ENST00000424544 PLA2G5P39877 138 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 ALDH7A1P49419 539 aaKnown RBP18.04■□□□□ 0.48
DDR1-234ENST00000424544 RAB27AP51159 221 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 POLGP54098 1239 aaPredicted RBP18.04■□□□□ 0.48
DDR1-234ENST00000424544 POU5F1BQ06416 359 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 CUL4AQ13619 759 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 PLPP4Q5VZY2 271 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 TWF2Q6IBS0 349 aaKnown RBP18.04■□□□□ 0.48
DDR1-234ENST00000424544 TMEM173Q86WV6 379 aaPredicted RBP18.04■□□□□ 0.48
DDR1-234ENST00000424544 CCDC83Q8IWF9 413 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 DIS3L2Q8IYB7 885 aaKnown RBP18.04■□□□□ 0.48
DDR1-234ENST00000424544 EIF2AK1Q9BQI3 630 aaKnown RBP18.04■□□□□ 0.48
DDR1-234ENST00000424544 NRDE2Q9H7Z3 1164 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 BRMS1Q9HCU9 246 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 TBC1D13Q9NVG8 400 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 PCDHB2Q9Y5E7 798 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 IRAK3Q9Y616 596 aa18.04■□□□□ 0.48
DDR1-234ENST00000424544 PTENP60484 403 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 EMC2Q15006 297 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 XKR9Q5GH70 373 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 NOMO2Q5JPE7 1267 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 NCAPH2Q6IBW4 605 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 ANKRD54Q6NXT1 300 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 TPH2Q8IWU9 490 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 TCP11Q8WWU5 503 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 PHF7Q9BWX1 381 aaPredicted RBP18.03■□□□□ 0.48
DDR1-234ENST00000424544 TTC12Q9H892 705 aaPredicted RBP18.03■□□□□ 0.48
DDR1-234ENST00000424544 ANKEF1Q9NU02 776 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 WDFY4Q6ZS81 3184 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 TECTAO75443 2155 aa18.03■□□□□ 0.48
DDR1-234ENST00000424544 CARNS1A5YM72 827 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 NT5C1B-RDH14C9J2C7 533 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 MARCH6O60337 910 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 B4GALT3O60512 393 aa18.02■□□□□ 0.48
DDR1-234ENST00000424544 HOXB8P17481 243 aaPredicted RBP18.02■□□□□ 0.48
DDR1-234ENST00000424544 ARL2P36404 184 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms