RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 GRIN1Q05586 938 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 NCBP1Q09161 790 aaKnown RBP10.71□□□□□ -0.69
HERC3-204ENST00000422770 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 DEPTORQ8TB45 409 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 CPB2Q96IY4 423 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 SPATA32Q96LK8 384 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 AK8Q96MA6 479 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 MMTAG2Q9BU76 263 aaKnown RBP10.71□□□□□ -0.69
HERC3-204ENST00000422770 MINDY3Q9H8M7 445 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 PLXNA4Q9HCM2 1894 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 TFIP11Q9UBB9 837 aaKnown RBP10.71□□□□□ -0.69
HERC3-204ENST00000422770 STXBP5LQ9Y2K9 1186 aa10.71□□□□□ -0.69
HERC3-204ENST00000422770 TCHHQ07283 1943 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 EPOPA6NHQ4 379 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 CCDC169A6NNP5 214 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 C9IYK1 514 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 DGKIO75912 1065 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 CYP11B2P19099 503 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 ARL2P36404 184 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 GRB10Q13322 594 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 DSC3Q14574 896 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 KARSQ15046 597 aaKnown RBP10.7□□□□□ -0.7
HERC3-204ENST00000422770 PPP2R5AQ15172 486 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 SKIV2LQ15477 1246 aaKnown RBP10.7□□□□□ -0.7
HERC3-204ENST00000422770 CSPP1Q1MSJ5 1256 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 KCNK18Q7Z418 384 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 ECHDC2Q86YB7 292 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 TMEM192Q8IY95 271 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 BSNDQ8WZ55 320 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 CLIC6Q96NY7 704 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 RUSC1Q9BVN2 902 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 APOL6Q9BWW8 343 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
HERC3-204ENST00000422770 CSRNP2Q9H175 543 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 AGPAT5Q9NUQ2 364 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 TMEM161AQ9NX61 479 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 INPP5FQ9Y2H2 1132 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 ATG2AQ2TAZ0 1938 aa10.7□□□□□ -0.7
HERC3-204ENST00000422770 COL4A6Q14031 1691 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 COL6A3P12111 3177 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 HOXA2O43364 376 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 HIP1RO75146 1068 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 YEATS4O95619 227 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 PLCG1P19174 1290 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 NASPP49321 788 aaPredicted RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 RAB27AP51159 221 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 PTENP60484 403 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 ERVK-21P61565 698 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 CACNB1Q02641 598 aaPredicted RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 PTPAQ15257 358 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 EPC2Q52LR7 807 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 GPBP1Q86WP2 473 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 CDR2LQ86X02 465 aaPredicted RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 CMTR2Q8IYT2 770 aaKnown RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 KRI1Q8N9T8 703 aaKnown RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 HELQQ8TDG4 1101 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 LEO1Q8WVC0 666 aaPredicted RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 SYMPKQ92797 1274 aaKnown RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 KIFAP3Q92845 792 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 LPPQ93052 612 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 EPSTI1Q96J88 318 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 DRC1Q96MC2 740 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 SAMD11Q96NU1 681 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 PNMA5Q96PV4 448 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 KIFC3Q9BVG8 833 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 ZHX3Q9H4I2 956 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 CHST12Q9NRB3 414 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 FAM105AQ9NUU6 356 aa10.69□□□□□ -0.7
HERC3-204ENST00000422770 FBXO2Q9UK22 296 aaPredicted RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 MRPL42Q9Y6G3 142 aaKnown RBP10.69□□□□□ -0.7
HERC3-204ENST00000422770 SFI1A8K8P3 1242 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 SPTLC2O15270 562 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 B4GALT5O43286 388 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 TSPAN1O60635 241 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 PRKCBP05771 671 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 PLA2G4BP0C869 781 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 SKIP12755 728 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 MCM4P33991 863 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 ME1P48163 572 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 PEX3P56589 373 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 MBTD1Q05BQ5 628 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 DMP1Q13316 513 aaPredicted RBP10.68□□□□□ -0.7
HERC3-204ENST00000422770 GPM6BQ13491 265 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 ADGRE1Q14246 886 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 MCM6Q14566 821 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 SLC39A14Q15043 492 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 TMEM119Q4V9L6 283 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 ATL3Q6DD88 541 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 RINT1Q6NUQ1 792 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 NOTUMQ6P988 496 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 KCNG4Q8TDN1 519 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 PANK2Q9BZ23 570 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 SCAND2PQ9GZW5 306 aaPredicted RBP10.68□□□□□ -0.7
HERC3-204ENST00000422770 GBP3Q9H0R5 595 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 C2orf40Q9H1Z8 148 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 ELAC1Q9H777 363 aaKnown RBP10.68□□□□□ -0.7
HERC3-204ENST00000422770 KMT5AQ9NQR1 393 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 HCSTQ9UBK5 93 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms