RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GTF3C3Q9Y5Q9 886 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 PIEZO1Q92508 2521 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 A0A087WWV3 80 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 A0A0U1RQF3 1178 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 PRR33A8MZF0 331 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 USO1O60763 962 aaKnown RBP24.36■■□□□ 1.49
TRAF4-204ENST00000422344 ALADP13716 330 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 RPA1P27694 616 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 CCT6AP40227 531 aaKnown RBP24.36■■□□□ 1.49
TRAF4-204ENST00000422344 C4orf32Q8N8J7 132 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 TMEM117Q9H0C3 514 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 XPNPEP1Q9NQW7 623 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 STK24Q9Y6E0 443 aa24.36■■□□□ 1.49
TRAF4-204ENST00000422344 EOMESO95936 686 aa24.35■■□□□ 1.49
TRAF4-204ENST00000422344 SKIP12755 728 aa24.35■■□□□ 1.49
TRAF4-204ENST00000422344 NAALADL2Q58DX5 795 aa24.35■■□□□ 1.49
TRAF4-204ENST00000422344 POTEGQ6S5H5 508 aa24.35■■□□□ 1.49
TRAF4-204ENST00000422344 P2RX5Q93086 422 aa24.35■■□□□ 1.49
TRAF4-204ENST00000422344 CLDND1Q9NY35 253 aa24.35■■□□□ 1.49
TRAF4-204ENST00000422344 DBR1Q9UK59 544 aaKnown RBP24.35■■□□□ 1.49
TRAF4-204ENST00000422344 PCDHB12Q9Y5F1 795 aa24.35■■□□□ 1.49
TRAF4-204ENST00000422344 ARHGEF35A5YM69 484 aa24.34■■□□□ 1.49
TRAF4-204ENST00000422344 GRM6O15303 877 aa24.34■■□□□ 1.49
TRAF4-204ENST00000422344 MUTP22033 750 aa24.34■■□□□ 1.49
TRAF4-204ENST00000422344 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.34■■□□□ 1.49
TRAF4-204ENST00000422344 FAM50BQ9Y247 325 aa24.34■■□□□ 1.49
TRAF4-204ENST00000422344 ERLIN2O94905 339 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 PRPHP41219 470 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 RAB27AP51159 221 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 CUL4AQ13619 759 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 PDIA5Q14554 519 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 COL19A1Q14993 1142 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 DTHD1Q6ZMT9 781 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 LRRC43Q8N309 656 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 MCPH1Q8NEM0 835 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 POLR3FQ9H1D9 316 aaPredicted RBP24.33■■□□□ 1.49
TRAF4-204ENST00000422344 ALG13Q9NP73 1137 aaKnown RBP24.33■■□□□ 1.49
TRAF4-204ENST00000422344 AGPAT5Q9NUQ2 364 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 TYW1Q9NV66 732 aaKnown RBP24.33■■□□□ 1.49
TRAF4-204ENST00000422344 PLAGL2Q9UPG8 496 aa24.33■■□□□ 1.49
TRAF4-204ENST00000422344 KIAA1671Q9BY89 1806 aa24.33■■□□□ 1.48
TRAF4-204ENST00000422344 FNDC1Q4ZHG4 1894 aaPredicted RBP24.32■■□□□ 1.48
TRAF4-204ENST00000422344 C5orf42Q9H799 3197 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 ATG2AQ2TAZ0 1938 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 CSPG5O95196 566 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 LAG3P18627 525 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 NCBP1Q09161 790 aaKnown RBP24.32■■□□□ 1.48
TRAF4-204ENST00000422344 CSPP1Q1MSJ5 1256 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 MAEAQ7L5Y9 396 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 KLHL23Q8NBE8 558 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 ASAP3Q8TDY4 903 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 SNX29Q8TEQ0 813 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 CASD1Q96PB1 797 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 TRAIPQ9BWF2 469 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 MINDY3Q9H8M7 445 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 FAM105AQ9NUU6 356 aa24.32■■□□□ 1.48
TRAF4-204ENST00000422344 INO80B-WBP1J3KQ70 363 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 DCXO43602 365 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 PDCP20941 246 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 ARL2P36404 184 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 PTENP60484 403 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 ZP2Q05996 745 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 PCBP1Q15365 356 aaKnown RBP eCLIP24.31■■□□□ 1.484e-7■■■■■ 32.7
TRAF4-204ENST00000422344 KRT79Q5XKE5 535 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 ZNF598Q86UK7 904 aaKnown RBP24.31■■□□□ 1.48
TRAF4-204ENST00000422344 IGSF22Q8N9C0 903 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 HELQQ8TDG4 1101 aa24.31■■□□□ 1.48
TRAF4-204ENST00000422344 ITGB1P05556 798 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 LTBRP36941 435 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 POU5F1BQ06416 359 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 CAPSQ13938 189 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 CLLU1OSQ5K130 101 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 PADI6Q6TGC4 694 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 THNSL1Q8IYQ7 743 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 COLGALT1Q8NBJ5 622 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 PGBD4Q96DM1 585 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 MRPL9Q9BYD2 267 aaKnown RBP24.3■■□□□ 1.48
TRAF4-204ENST00000422344 RNF19AQ9NV58 838 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 PRKAG3Q9UGI9 489 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 KIAA1024Q9UPX6 916 aa24.3■■□□□ 1.48
TRAF4-204ENST00000422344 VPS37CA5D8V6 355 aaPredicted RBP24.29■■□□□ 1.48
TRAF4-204ENST00000422344 NCK2O43639 380 aa24.29■■□□□ 1.48
TRAF4-204ENST00000422344 ATF7P17544 494 aaPredicted RBP24.29■■□□□ 1.48
TRAF4-204ENST00000422344 GLRA2P23416 452 aa24.29■■□□□ 1.48
TRAF4-204ENST00000422344 ATP2C1P98194 919 aaPredicted RBP24.29■■□□□ 1.48
TRAF4-204ENST00000422344 CLUL1Q15846 466 aa24.29■■□□□ 1.48
TRAF4-204ENST00000422344 GLB1LQ6UWU2 654 aa24.29■■□□□ 1.48
TRAF4-204ENST00000422344 RSPH1Q8WYR4 309 aa24.29■■□□□ 1.48
TRAF4-204ENST00000422344 GPRC5CQ9NQ84 441 aa24.29■■□□□ 1.48
TRAF4-204ENST00000422344 DDX19AQ9NUU7 478 aaKnown RBP24.29■■□□□ 1.48
TRAF4-204ENST00000422344 HCSTQ9UBK5 93 aa24.29■■□□□ 1.48
TRAF4-204ENST00000422344 PCDHB2Q9Y5E7 798 aa24.29■■□□□ 1.48
TRAF4-204ENST00000422344 LRRIQ4A6NIV6 560 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 HYAL1Q12794 435 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 LONRF3Q496Y0 759 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 BRAPQ7Z569 592 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 IFNLR1Q8IU57 520 aaPredicted RBP24.28■■□□□ 1.48
TRAF4-204ENST00000422344 ADHFE1Q8IWW8 467 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 SPPL3Q8TCT6 385 aa24.28■■□□□ 1.48
TRAF4-204ENST00000422344 POF1BQ8WVV4 589 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms