RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 NOMO2Q5JPE7 1267 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 MIER3Q7Z3K6 550 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 FRMD5Q7Z6J6 570 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 RHPN2Q8IUC4 686 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 ST13P5Q8NFI4 369 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-203ENST00000420503 KCNB2Q92953 911 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 RIT2Q99578 217 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 MRPL9Q9BYD2 267 aaKnown RBP14.49□□□□□ -0.09
LINC00339-203ENST00000420503 GCOM2Q9BZD3 368 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-203ENST00000420503 MINDY3Q9H8M7 445 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 FAM105AQ9NUU6 356 aa14.49□□□□□ -0.09
LINC00339-203ENST00000420503 SUCLA2Q9P2R7 463 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-203ENST00000420503 DOCK8Q8NF50 2099 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 PRR23AA6NEV1 266 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 DDX11L8A8MPP1 907 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 NARSO43776 548 aaKnown RBP14.48□□□□□ -0.09
LINC00339-203ENST00000420503 SLC37A4O43826 429 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 N4BP1O75113 896 aaKnown RBP14.48□□□□□ -0.09
LINC00339-203ENST00000420503 CDC45O75419 566 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 NPR3P17342 541 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 GNA11P29992 359 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 MTHFRP42898 656 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 JAK3P52333 1124 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 KRT32Q14532 448 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 AGMOQ6ZNB7 445 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 ANO5Q75V66 913 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 TAS1R1Q7RTX1 841 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 DDX53Q86TM3 631 aaKnown RBP14.48□□□□□ -0.09
LINC00339-203ENST00000420503 UBALD2Q8IYN6 164 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 FLCNQ8NFG4 579 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 ETNPPLQ8TBG4 499 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 CCDC12Q8WUD4 166 aaPredicted RBP14.48□□□□□ -0.09
LINC00339-203ENST00000420503 NECTIN4Q96NY8 510 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 NIFKQ9BYG3 293 aaKnown RBP14.48□□□□□ -0.09
LINC00339-203ENST00000420503 DACT1Q9NYF0 836 aa14.48□□□□□ -0.09
LINC00339-203ENST00000420503 CCDC196A0A1B0GTZ2 297 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 C2CD2LO14523 706 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 CNPP09543 421 aaKnown RBP14.47□□□□□ -0.09
LINC00339-203ENST00000420503 RPS6KB1P23443 525 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 PDIA3P30101 505 aaKnown RBP14.47□□□□□ -0.09
LINC00339-203ENST00000420503 HSPA4P34932 840 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 NLRP5P59047 1200 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 XKR3Q5GH77 459 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 UBXN11Q5T124 520 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 ASTLQ6HA08 431 aaPredicted RBP14.47□□□□□ -0.09
LINC00339-203ENST00000420503 BLOC1S2Q6QNY1 142 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 CATSPER4Q7RTX7 472 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 ZDHHC14Q8IZN3 488 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 RSAD2Q8WXG1 361 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 KLHL5Q96PQ7 755 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 RNF26Q9BY78 433 aaPredicted RBP14.47□□□□□ -0.09
LINC00339-203ENST00000420503 AGXT2Q9BYV1 514 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 IFT122Q9HBG6 1241 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 PCDHB2Q9Y5E7 798 aa14.47□□□□□ -0.09
LINC00339-203ENST00000420503 COL4A3Q01955 1670 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 M0R2N6 131 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 MAFO75444 373 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-203ENST00000420503 POMCP01189 267 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 IFNAR1P17181 557 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 SFPQP23246 707 aaKnown RBP eCLIP14.46□□□□□ -0.09
LINC00339-203ENST00000420503 SFNP31947 248 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 TOB2Q14106 344 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-203ENST00000420503 Q4G0T1 1027 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 ATAT1Q5SQI0 421 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 POTEGQ6S5H5 508 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 GLB1LQ6UWU2 654 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 FAM43BQ6ZT52 329 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-203ENST00000420503 GPR149Q86SP6 731 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 CABP7Q86V35 215 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 TMEM143Q96AN5 459 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 B3GALT6Q96L58 329 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 CHST12Q9NRB3 414 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 DZANK1Q9NVP4 752 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 MARCH5Q9NX47 278 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 PRG3Q9Y2Y8 225 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-203ENST00000420503 IRAK3Q9Y616 596 aa14.46□□□□□ -0.09
LINC00339-203ENST00000420503 PROB1E7EW31 1015 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 ZBTB39O15060 712 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 LILRB3O75022 631 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
LINC00339-203ENST00000420503 HOXA11P31270 313 aaPredicted RBP14.45□□□□□ -0.1
LINC00339-203ENST00000420503 NBL1P41271 181 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 USP11P51784 963 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 CLCN4P51793 760 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 AKAP17AQ02040 695 aaKnown RBP14.45□□□□□ -0.1
LINC00339-203ENST00000420503 RNASELQ05823 741 aaKnown RBP14.45□□□□□ -0.1
LINC00339-203ENST00000420503 INF2Q27J81 1249 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 CCDC148Q8NFR7 591 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 BICD2Q8TD16 824 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 MBOAT7Q96N66 472 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 TRAIPQ9BWF2 469 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 RNF39Q9H2S5 420 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 MFSD1Q9H3U5 465 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 CYP26B1Q9NR63 512 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 AGPAT5Q9NUQ2 364 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 VAV3Q9UKW4 847 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 PCDHA4Q9UN74 947 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 KCNJ14Q9UNX9 436 aa14.45□□□□□ -0.1
LINC00339-203ENST00000420503 ARID2Q68CP9 1835 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms