RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 SMCR8Q8TEV9 937 aaPredicted RBP7.63□□□□□ -1.19
TVP23C-202ENST00000419890 SDR42E1Q8WUS8 393 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 LMBR1Q8WVP7 490 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 MIEF2Q96C03 454 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 TLCD1Q96CP7 247 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 NAP1L4Q99733 375 aaKnown RBP7.63□□□□□ -1.19
TVP23C-202ENST00000419890 OXCT2Q9BYC2 517 aaPredicted RBP7.63□□□□□ -1.19
TVP23C-202ENST00000419890 NSRP1Q9H0G5 558 aaKnown RBP7.63□□□□□ -1.19
TVP23C-202ENST00000419890 TMEM60Q9H2L4 133 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 SEMA6BQ9H3T3 888 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 ODF2LQ9ULJ1 636 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 SUFUQ9UMX1 484 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 TFR2Q9UP52 801 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 MAPK8IP1Q9UQF2 711 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 COL4A3BPQ9Y5P4 624 aa7.63□□□□□ -1.19
TVP23C-202ENST00000419890 DICER1Q9UPY3 1922 aaKnown RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 KDM3AQ9Y4C1 1321 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 LIN7AO14910 233 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 PPIP5K2O43314 1243 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 PALMO75781 387 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 VEGFAP15692 232 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 CTNNA1P35221 906 aaKnown RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 HSD17B3P37058 310 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 SLC1A4P43007 532 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 SCTRP47872 440 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 EIF6P56537 245 aaKnown RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 GPSM2P81274 684 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 SATB1Q01826 763 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 CHRNDQ07001 517 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 ZNF844Q08AG5 666 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 IFT88Q13099 833 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 RPS6KA1Q15418 735 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 AOC3Q16853 763 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 TMEM266Q2M3C6 531 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 EDRF1Q3B7T1 1238 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 TMEM119Q4V9L6 283 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 CAVIN4Q5BKX8 364 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 HYIQ5T013 277 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 RNF187Q5TA31 235 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 SLFN11Q7Z7L1 901 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 NIM1KQ8IY84 436 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 GBP7Q8N8V2 638 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 ANKS4BQ8N8V4 417 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 CCT6BQ92526 530 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 LARP4BQ92615 738 aaKnown RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 PGM2Q96G03 612 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 SEC16BQ96JE7 1060 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 KRT12Q99456 494 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 NAP1L3Q99457 506 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 JPH2Q9BR39 696 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 PLCD4Q9BRC7 762 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 TMEM109Q9BVC6 243 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 MXD3Q9BW11 206 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 RAB17Q9H0T7 212 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 STMN4Q9H169 189 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 MMRN2Q9H8L6 949 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 EBF2Q9HAK2 575 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 ZNF287Q9HBT7 754 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 C6orf50Q9HD87 102 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 DCP1AQ9NPI6 582 aaPredicted RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 ANKIB1Q9P2G1 1089 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 DDX20Q9UHI6 824 aaKnown RBP7.62□□□□□ -1.19
TVP23C-202ENST00000419890 SALL4Q9UJQ4 1053 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 NENFQ9UMX5 172 aa7.62□□□□□ -1.19
TVP23C-202ENST00000419890 NCANO14594 1321 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 PALM3A6NDB9 673 aaPredicted RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 TSPY2A6NKD2 308 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 USP17L12C9JPN9 530 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 USP17L21D6R901 530 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 FZD9O00144 591 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 EPHB6O15197 1021 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 COBLO75128 1261 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 PPFIA2O75334 1257 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 FLOT1O75955 427 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 FAM153BP0C7A2 387 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 ZBTB48P10074 688 aaPredicted RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 ALADP13716 330 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 HSPA6P17066 643 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 HOXB4P17483 251 aaPredicted RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 DRD4P21917 467 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 KLRC1P26715 233 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 MATR3P43243 847 aaKnown RBP eCLIP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 ZNF131P52739 623 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 DRG2P55039 364 aaKnown RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 IRX1P78414 480 aaPredicted RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 GFPT1Q06210 699 aaPredicted RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 BYSLQ13895 437 aaKnown RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 ZKSCAN8Q15776 578 aaPredicted RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 UAP1Q16222 522 aaPredicted RBP7.61□□□□□ -1.19
TVP23C-202ENST00000419890 ASIC2Q16515 512 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 FAM153CQ494X1 144 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 WDR44Q5JSH3 913 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 FAM83BQ5T0W9 1011 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 ERMARDQ5T6L9 678 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 KCTD16Q68DU8 428 aa7.61□□□□□ -1.19
TVP23C-202ENST00000419890 TLDC1Q6P9B6 456 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms