RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 CDC23Q9UJX2 597 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 TLK1Q9UKI8 766 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 PCDHA13Q9Y5I0 950 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 PFASO15067 1338 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 KIAA0391O15091 583 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 GH1P01241 217 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 INPP5BP32019 993 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 SEPT6Q14141 434 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 KNOP1Q1ED39 458 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 CEP55Q53EZ4 464 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 SLC35F6Q8N357 371 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 GDAP1L1Q96MZ0 367 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 NUDCD1Q96RS6 583 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 EIF2AK1Q9BQI3 630 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 POC1B-GALNT4F8VUJ3 575 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 MSH2P43246 934 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 VEPH1Q14D04 833 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 NOP9Q86U38 636 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 FAM71BQ8TC56 605 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 DHX38Q92620 1227 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 ADAM22Q9P0K1 906 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 BNIP3LO60238 219 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 RWDD2BP57060 319 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 CDO1Q16878 200 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 FKBP1CQ5VVH2 108 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 JADE1Q6IE81 842 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 C3orf67Q6ZVT6 689 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 VSTM4Q8IW00 320 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 LRRC8CQ8TDW0 803 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 PGBD4Q96DM1 585 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 CDCA5Q96FF9 252 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 PANX2Q96RD6 677 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 LBHD1Q9BQE6 289 aaPredicted RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 ALDH8A1Q9H2A2 487 aaPredicted RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 SMARCAD1Q9H4L7 1026 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 NGRNQ9NPE2 291 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 CEP72Q9P209 647 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 BAG5Q9UL15 447 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 STAP1Q9ULZ2 295 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 DIS3Q9Y2L1 958 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 GPR75-ASB3A0A0A6YYF3 556 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 TRAPPC3O43617 180 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 ZNF543Q08ER8 600 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 FSTL1Q12841 308 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 PHLDB2Q86SQ0 1253 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 GPD1LQ8N335 351 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.04□□□□□ -0.96
UBR4-206ENST00000419533 HSPH1Q92598 858 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 PPP1R13BQ96KQ4 1090 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 EFCC1Q9HA90 598 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 IRAK4Q9NWZ3 460 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 APLP1P51693 650 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 VAMP7P51809 220 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 IRX4P78413 519 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 KRT33BQ14525 404 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 KRT31Q15323 416 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 OXER1Q8TDS5 423 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 ZWILCHQ9H900 591 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 CICQ96RK0 1608 aaPredicted RBP9.04□□□□□ -0.96
UBR4-206ENST00000419533 UBE4BO95155 1302 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 CASQ2O14958 399 aaPredicted RBP9.04□□□□□ -0.96
UBR4-206ENST00000419533 TJP3O95049 919 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 PAMP19021 973 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 PMLP29590 882 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 ALKBH5Q6P6C2 394 aaKnown RBP9.04□□□□□ -0.96
UBR4-206ENST00000419533 MCUQ8NE86 351 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 GPRC5AQ8NFJ5 357 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 RBM41Q96IZ5 413 aaKnown RBP9.04□□□□□ -0.96
UBR4-206ENST00000419533 TAF1DQ9H5J8 278 aaPredicted RBP9.04□□□□□ -0.96
UBR4-206ENST00000419533 VCPKMTQ9H867 229 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 MID2Q9UJV3 735 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 SALL1Q9NSC2 1324 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 POTEIP0CG38 1075 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 CPB1P15086 417 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 CDC27P30260 824 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 GCLCP48506 637 aaPredicted RBP9.04□□□□□ -0.96
UBR4-206ENST00000419533 GCLMP48507 274 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 STX1BP61266 288 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 IL9RQ01113 521 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 TFDP2Q14188 446 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 TMEM270Q6UE05 265 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 ENOSF1Q7L5Y1 443 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 MYLK4Q86YV6 388 aaPredicted RBP9.04□□□□□ -0.96
UBR4-206ENST00000419533 CHST13Q8NET6 341 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 UHMK1Q8TAS1 419 aaKnown RBP9.04□□□□□ -0.96
UBR4-206ENST00000419533 TTC25Q96NG3 672 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 ACAP3Q96P50 834 aa9.04□□□□□ -0.96
UBR4-206ENST00000419533 STXBP3O00186 592 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 MOCS3O95396 460 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 SOX5P35711 763 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 TSNAXIP1Q2TAA8 658 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 ZNF394Q53GI3 561 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 XKR3Q5GH77 459 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 KIAA1755Q5JYT7 1200 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 DACT2Q5SW24 774 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 C16orf86Q6ZW13 317 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms