RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 OPTNQ96CV9 577 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 SLC7A6OSQ96CW6 309 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 ERP27Q96DN0 273 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 BRIP1Q9BX63 1249 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 DENND2DQ9H6A0 471 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 HAO1Q9UJM8 370 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 PCDHA3Q9Y5H8 950 aa8.64□□□□□ -1.03
HMGXB4-202ENST00000418170 PODXLO00592 558 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 CCNT1O60563 726 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 ENTPD5O75356 428 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 SETSIPP0DME0 302 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 SKIP12755 728 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 EPS15P42566 896 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 MPP2Q14168 576 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 RCN2Q14257 317 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 LONRF1Q17RB8 773 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 LMOD2Q6P5Q4 547 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 PTPRN2Q92932 1015 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 PNMA5Q96PV4 448 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 PLEKHG4BQ96PX9 1271 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 RIOK1Q9BRS2 568 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 RTCBQ9Y3I0 505 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 TRAFD1O14545 582 aaPredicted RBP8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 PHF2O75151 1096 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 UCHL3P15374 230 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 STX2P32856 288 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 CACNA2D1P54289 1103 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 LRRC8CQ8TDW0 803 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 DDX12PQ92771 950 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 NDNQ99608 321 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 KIAA1683Q9H0B3 1180 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 KCNK9Q9NPC2 374 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 ARMCX3Q9UH62 379 aaPredicted RBP8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 PPP1R9AQ9ULJ8 1098 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 CHKBQ9Y259 395 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 POTEFA5A3E0 1075 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 TJP3O95049 919 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 POTEJP0CG39 1038 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 ACTN1P12814 892 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 KCNA3P22001 575 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 EPHB2P29323 1055 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 GSTT1P30711 240 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 CHRNA3P32297 505 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 RASSF2P50749 326 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 LETM2Q2VYF4 491 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 POTEEQ6S8J3 1075 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 TRMT10CQ7L0Y3 403 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 VPS36Q86VN1 386 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 RBM46Q8TBY0 533 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 C18orf8Q96DM3 657 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 LRRC37BQ96QE4 947 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 PCYOX1Q9UHG3 505 aa8.63□□□□□ -1.03
HMGXB4-202ENST00000418170 SNAP23O00161 211 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 PENKP01210 267 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 T-ENOLP0DO92 83 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 KRT13P13646 458 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 TAC1P20366 129 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 KCNH2Q12809 1159 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 BICDL1Q6ZP65 573 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 NCSTNQ92542 709 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 GATA6Q92908 595 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 PITPNM3Q9BZ71 974 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 TLE6Q9H808 572 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 OSGEPQ9NPF4 335 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 BARHL2Q9NY43 387 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 PDP2Q9P2J9 529 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 ATXN10Q9UBB4 475 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 NCANO14594 1321 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 LAMB1P07942 1786 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 MAGEA13PA6NCF6 341 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 DDX3XO00571 662 aaKnown RBP eCLIP8.62□□□□□ -1.031e-7■□□□□ 11
HMGXB4-202ENST00000418170 ATP9AO75110 1047 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 FAM163BP0C2L3 166 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 BRAFP15056 766 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 PPATQ06203 517 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 MYBPC3Q14896 1274 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 DPY19L2Q6NUT2 758 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 ARHGEF18Q6ZSZ5 1173 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 RAD54LQ92698 747 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 ART4Q93070 314 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 LRRC27Q9C0I9 530 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 USH1CQ9Y6N9 552 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 KAT6BQ8WYB5 2073 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 VCAM1P19320 739 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 SLC9A1P19634 815 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 SERPINB4P48594 390 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 GALCP54803 685 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 CACNA1SQ13698 1873 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 RRP1BQ14684 758 aaKnown RBP8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 SNX30Q5VWJ9 437 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 KIF6Q6ZMV9 814 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 HEATR3Q7Z4Q2 680 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 NLRP10Q86W26 655 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 RFFLQ8WZ73 363 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 GBP5Q96PP8 586 aa8.62□□□□□ -1.03
HMGXB4-202ENST00000418170 VCX3BQ9H321 246 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms