RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 JAG1P78504 1218 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 HTRA4P83105 476 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 RPL6Q02878 288 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 BFSP2Q13515 415 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 SHROOM1Q2M3G4 852 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 DUSP27Q5VZP5 1158 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 CASC1Q6TDU7 716 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 WFDC8Q8IUA0 241 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 EFHBQ8N7U6 833 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 GPBAR1Q8TDU6 330 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 HNRNPLLQ8WVV9 542 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 KLHDC7BQ96G42 594 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 BORCS6Q96GS4 357 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 C11orf84Q9BUA3 381 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 CCDC86Q9H6F5 360 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 SMG5Q9UPR3 1016 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 NR2E1Q9Y466 385 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 MAPK8IP3Q9UPT6 1336 aa6.44□□□□□ -1.38
ECHDC1-206ENST00000417628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 GFRA2O00451 464 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 SMAD7O15105 426 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 ZNF862O60290 1169 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 CSPG5O95196 566 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 SLC25A27O95847 323 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 BPNT1O95861 308 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 CYP11A1P05108 521 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 TGM1P22735 817 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 MAOBP27338 520 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 CTNNB1P35222 781 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 ARL4DP49703 201 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 RIPK4P57078 832 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 ACVR2BQ13705 512 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 BMS1Q14692 1282 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 COG2Q14746 738 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 SETDB1Q15047 1291 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 POU4F3Q15319 338 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 FSCN1Q16658 493 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 HS1BP3Q53T59 392 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 KSR2Q6VAB6 950 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 GK5Q6ZS86 529 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 CERS3Q8IU89 383 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 GALNT11Q8NCW6 608 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 MKL1Q969V6 931 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 FERD3LQ96RJ6 166 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 PLEKHF1Q96S99 279 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 YME1L1Q96TA2 773 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 EHMT1Q9H9B1 1298 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 PARD6AQ9NPB6 346 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 GMEB2Q9UKD1 530 aa6.43□□□□□ -1.38
ECHDC1-206ENST00000417628 ATG2AQ2TAZ0 1938 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 PI4KAP2A4QPH2 592 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 C5orf67F2Z3F1 127 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 TULP2O00295 520 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 CHL1O00533 1208 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 GRM6O15303 877 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 ARHGAP6O43182 974 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 NRDCO43847 1150 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 ATE1O95260 518 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 GLP2RO95838 553 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 MMP1P03956 469 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 AMHP03971 560 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 NID1P14543 1247 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 SSR1P43307 286 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 FOXO4P98177 505 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 LMOD3Q0VAK6 560 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 RAB33AQ14088 237 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 INPP5AQ14642 412 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 ZNF746Q6NUN9 644 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 TMED8Q6PL24 325 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 MAMDC4Q6UXC1 1216 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 FAM43BQ6ZT52 329 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 KIAA1211Q6ZU35 1233 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 NOL8Q76FK4 1167 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 TLK2Q86UE8 772 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 DZIP1Q86YF9 867 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 OTUD6BQ8N6M0 293 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 PI4KAP1Q8N8J0 262 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 IRF7Q92985 503 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 WDR89Q96FK6 387 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 CORO1BQ9BR76 489 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 KIAA1683Q9H0B3 1180 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 ABHD16BQ9H3Z7 469 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 MYH16Q9H6N6 1097 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 KRT82Q9NSB4 513 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 HOXC10Q9NYD6 342 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 PCDHA4Q9UN74 947 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 PCDHB14Q9Y5E9 798 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 ASTN1O14525 1302 aa6.42□□□□□ -1.38
ECHDC1-206ENST00000417628 TLDC2A0PJX2 215 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 K7ELQ4 463 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 DDX3YO15523 660 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 KIF1CO43896 1103 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 EIF4EBP3O60516 100 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 ADAM11O75078 769 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 PARNO95453 639 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 DLGAP3O95886 979 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 RB1P06400 928 aa6.41□□□□□ -1.38
ECHDC1-206ENST00000417628 PLA2G2AP14555 144 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms