RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ARL2P36404 184 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 NPTX2P47972 431 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 EFNA5P52803 228 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 CRYBB1P53674 252 aaPredicted RBP9.32□□□□□ -0.92
TRIM48-201ENST00000417545 CCL23P55773 120 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 FAAP100Q0VG06 881 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 NFX1Q12986 1120 aaKnown RBP9.32□□□□□ -0.92
TRIM48-201ENST00000417545 PAK2Q13177 524 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 MAPK6Q16659 721 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 ZNF618Q5T7W0 954 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 ISM2Q6H9L7 571 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 SRGAP1Q7Z6B7 1085 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 TMEM199Q8N511 208 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 DNAJC19Q96DA6 116 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 LBHD1Q9BQE6 289 aaPredicted RBP9.32□□□□□ -0.92
TRIM48-201ENST00000417545 SLC39A2Q9NP94 309 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 PDLIM7Q9NR12 457 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 PRMT7Q9NVM4 692 aaPredicted RBP9.32□□□□□ -0.92
TRIM48-201ENST00000417545 KIAA1468Q9P260 1216 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 DACH1Q9UI36 760 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 PCDHB13Q9Y5F0 798 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 PCDHA5Q9Y5H7 936 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 ALPK3Q96L96 1907 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 DENND3A2RUS2 1198 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 PRKCBP05771 671 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 GHRP10912 638 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 IBSPP21815 317 aaPredicted RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 NMT1P30419 496 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 CYP2C18P33260 490 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 LIG4P49917 911 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 ZNF131P52739 623 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 MAPK7Q13164 816 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 KCNB1Q14721 858 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 HAUS6Q7Z4H7 955 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 APBB1IPQ7Z5R6 666 aaPredicted RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 RPAINQ86UA6 219 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 DAW1Q8N136 415 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 LINC01465Q8N7H1 131 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 SPIRE2Q8WWL2 714 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 BSNDQ8WZ55 320 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 DHX38Q92620 1227 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 HVCN1Q96D96 273 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 KIFC3Q9BVG8 833 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 NOC4LQ9BVI4 516 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 OLFML3Q9NRN5 406 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 SIP14410 1827 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 UBE4BO95155 1302 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 GPR182O15218 404 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 MAPTP10636 758 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 DARSP14868 501 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 ZSCAN20P17040 1043 aaPredicted RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 EIF4BP23588 611 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 RFC2P35250 354 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 PPP1R2P41236 205 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 NCKAP1LP55160 1127 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 PTENP60484 403 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 POU5F1BQ06416 359 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 PRPF4BQ13523 1007 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 ZNF658Q5TYW1 1059 aaPredicted RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 TSHZ1Q6ZSZ6 1077 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 DEFB128Q7Z7B8 93 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 UBE2Q1Q7Z7E8 422 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 MYOCDQ8IZQ8 938 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 TRIML1Q8N9V2 468 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 USP38Q8NB14 1042 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 NOC3LQ8WTT2 800 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 WNT8BQ93098 351 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 SCLYQ96I15 445 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 ACCSQ96QU6 501 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 TSG101Q99816 390 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 ADPGKQ9BRR6 497 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 TCHPQ9BT92 498 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 TRIM6Q9C030 488 aaPredicted RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 GZF1Q9H116 711 aaPredicted RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 TMEM206Q9H813 350 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 TMEM63CQ9P1W3 806 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 MAN1B1Q9UKM7 699 aa9.31□□□□□ -0.92
TRIM48-201ENST00000417545 ZMYND8Q9ULU4 1186 aaPredicted RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 PIN4Q9Y237 131 aaKnown RBP9.31□□□□□ -0.92
TRIM48-201ENST00000417545 FRMD3A2A2Y4 597 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 PSMA7O14818 248 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 HNRNPDLO14979 420 aaKnown RBP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 KIAA0355O15063 1070 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 EIF3DO15371 548 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 KLRC4O43908 158 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 GPR32O75388 356 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 TIMP1P01033 207 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 CCDC192P0DO97 292 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 MYBP10242 640 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 ACTN1P12814 892 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 SYN1P17600 705 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 FGFR4P22455 802 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 MDM2Q00987 491 aaPredicted RBP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 FPGSQ05932 587 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 RBL2Q08999 1139 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 MGAT3Q09327 533 aa9.3□□□□□ -0.92
TRIM48-201ENST00000417545 PPIGQ13427 754 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRIM48-201ENST00000417545 PCBP1Q15365 356 aaKnown RBP eCLIP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms