RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FBXL16Q8N461 479 aa14.51□□□□□ -0.09
LINC00339-202ENST00000416769 TMEM169Q96HH4 297 aa14.51□□□□□ -0.09
LINC00339-202ENST00000416769 IGSF21Q96ID5 467 aa14.51□□□□□ -0.09
LINC00339-202ENST00000416769 AIFM3Q96NN9 605 aa14.51□□□□□ -0.09
LINC00339-202ENST00000416769 PRRX2Q99811 253 aa14.51□□□□□ -0.09
LINC00339-202ENST00000416769 RTN4Q9NQC3 1192 aaKnown RBP14.51□□□□□ -0.09
LINC00339-202ENST00000416769 BMP2KQ9NSY1 1161 aaPredicted RBP14.51□□□□□ -0.09
LINC00339-202ENST00000416769 PIN4Q9Y237 131 aaKnown RBP14.51□□□□□ -0.09
LINC00339-202ENST00000416769 FSD2A1L4K1 749 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 PI15O43692 258 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 DDHD2O94830 711 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 GALTP07902 379 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 ALDH7A1P49419 539 aaKnown RBP14.5□□□□□ -0.09
LINC00339-202ENST00000416769 RCAN1P53805 252 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 ITIH3Q06033 890 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 PTPN14Q15678 1187 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 TWF2Q6IBS0 349 aaKnown RBP14.5□□□□□ -0.09
LINC00339-202ENST00000416769 KIAA1841Q6NSI8 718 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 CES5AQ6NT32 575 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 B3GNT9Q6UX72 402 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 TDRD5Q8NAT2 981 aaKnown RBP14.5□□□□□ -0.09
LINC00339-202ENST00000416769 TBCKQ8TEA7 893 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 NLRP4Q96MN2 994 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 TEKT3Q9BXF9 490 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 NRBP2Q9NSY0 501 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 WRAP73Q9P2S5 460 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-202ENST00000416769 DBR1Q9UK59 544 aaKnown RBP14.5□□□□□ -0.09
LINC00339-202ENST00000416769 NR2E1Q9Y466 385 aa14.5□□□□□ -0.09
LINC00339-202ENST00000416769 EP300Q09472 2414 aaPredicted RBP14.5□□□□□ -0.09
LINC00339-202ENST00000416769 DOCK6Q96HP0 2047 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 DCHS1Q96JQ0 3298 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 IGKV6-21A0A0C4DH24 114 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 F8W810 466 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 EML1O00423 815 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 OFD1O75665 1012 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 EOMESO95936 686 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 CTSAP10619 480 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 NEK4P51957 841 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 NPEPPSP55786 919 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 NPY5RQ15761 445 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 NOMO2Q5JPE7 1267 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 MIER3Q7Z3K6 550 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 FRMD5Q7Z6J6 570 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 RHPN2Q8IUC4 686 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 ST13P5Q8NFI4 369 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-202ENST00000416769 RIT2Q99578 217 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 MRPL9Q9BYD2 267 aaKnown RBP14.49□□□□□ -0.09
LINC00339-202ENST00000416769 AGXT2Q9BYV1 514 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 GCOM2Q9BZD3 368 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-202ENST00000416769 MINDY3Q9H8M7 445 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 PDRG1Q9NUG6 133 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 FAM105AQ9NUU6 356 aa14.49□□□□□ -0.09
LINC00339-202ENST00000416769 SUCLA2Q9P2R7 463 aaPredicted RBP14.49□□□□□ -0.09
LINC00339-202ENST00000416769 DOCK8Q8NF50 2099 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 PRR23AA6NEV1 266 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 DDX11L8A8MPP1 907 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 NARSO43776 548 aaKnown RBP14.48□□□□□ -0.09
LINC00339-202ENST00000416769 SLC37A4O43826 429 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 N4BP1O75113 896 aaKnown RBP14.48□□□□□ -0.09
LINC00339-202ENST00000416769 NPR3P17342 541 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 GNA11P29992 359 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 MTHFRP42898 656 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 JAK3P52333 1124 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 AGMOQ6ZNB7 445 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 ANO5Q75V66 913 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 TAS1R1Q7RTX1 841 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 DDX53Q86TM3 631 aaKnown RBP14.48□□□□□ -0.09
LINC00339-202ENST00000416769 UBALD2Q8IYN6 164 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 FLCNQ8NFG4 579 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 ETNPPLQ8TBG4 499 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 CCDC12Q8WUD4 166 aaPredicted RBP14.48□□□□□ -0.09
LINC00339-202ENST00000416769 NECTIN4Q96NY8 510 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 NIFKQ9BYG3 293 aaKnown RBP14.48□□□□□ -0.09
LINC00339-202ENST00000416769 DACT1Q9NYF0 836 aa14.48□□□□□ -0.09
LINC00339-202ENST00000416769 CCDC196A0A1B0GTZ2 297 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 C2CD2LO14523 706 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 CNPP09543 421 aaKnown RBP14.47□□□□□ -0.09
LINC00339-202ENST00000416769 PDIA3P30101 505 aaKnown RBP14.47□□□□□ -0.09
LINC00339-202ENST00000416769 NLRP5P59047 1200 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 XKR3Q5GH77 459 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 UBXN11Q5T124 520 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 ASTLQ6HA08 431 aaPredicted RBP14.47□□□□□ -0.09
LINC00339-202ENST00000416769 CATSPER4Q7RTX7 472 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 ZDHHC14Q8IZN3 488 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 RSAD2Q8WXG1 361 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 KLHL5Q96PQ7 755 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 RNF26Q9BY78 433 aaPredicted RBP14.47□□□□□ -0.09
LINC00339-202ENST00000416769 IFT122Q9HBG6 1241 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 PCDHB2Q9Y5E7 798 aa14.47□□□□□ -0.09
LINC00339-202ENST00000416769 COL4A3Q01955 1670 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 M0R2N6 131 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 MAFO75444 373 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-202ENST00000416769 POMCP01189 267 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 IFNAR1P17181 557 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 SFPQP23246 707 aaKnown RBP eCLIP14.46□□□□□ -0.09
LINC00339-202ENST00000416769 SFNP31947 248 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 TOB2Q14106 344 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-202ENST00000416769 ANKRD1Q15327 319 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 Q4G0T1 1027 aa14.46□□□□□ -0.09
LINC00339-202ENST00000416769 ATAT1Q5SQI0 421 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms