RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 LZTS1Q9Y250 596 aa17.37■□□□□ 0.37
ACTB-202ENST00000414620 HIDE1A8MVS5 230 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 DCXO43602 365 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 GPR37L1O60883 481 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 ZC3H11AO75152 810 aaKnown RBP eCLIP17.36■□□□□ 0.37
ACTB-202ENST00000414620 EYA4O95677 639 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 ATP2B1P20020 1258 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 PPM1AP35813 382 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 RFC5P40937 340 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 LAMTOR4Q0VGL1 99 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 COASYQ13057 564 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 OTUD6AQ7L8S5 288 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 CCDC83Q8IWF9 413 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 SMRP1Q8NCR6 262 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 PRPF31Q8WWY3 499 aaKnown RBP17.36■□□□□ 0.37
ACTB-202ENST00000414620 MTRQ99707 1265 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 EIF2AK1Q9BQI3 630 aaKnown RBP17.36■□□□□ 0.37
ACTB-202ENST00000414620 APOL5Q9BWW9 433 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 MRPL9Q9BYD2 267 aaKnown RBP17.36■□□□□ 0.37
ACTB-202ENST00000414620 ZSWIM4Q9H7M6 989 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 MINDY3Q9H8M7 445 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 AGPAT5Q9NUQ2 364 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 USP15Q9Y4E8 981 aaPredicted RBP17.36■□□□□ 0.37
ACTB-202ENST00000414620 C5orf42Q9H799 3197 aa17.36■□□□□ 0.37
ACTB-202ENST00000414620 NEMFO60524 1076 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 SLITRK3O94933 977 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 ALADP13716 330 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 TXKP42681 527 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 BCAR1P56945 870 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 KRT17Q04695 432 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 PDE12Q6L8Q7 609 aaKnown RBP17.35■□□□□ 0.37
ACTB-202ENST00000414620 TMC7Q7Z402 723 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 RNF149Q8NC42 400 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 TCP11Q8WWU5 503 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 POP1Q99575 1024 aaKnown RBP17.35■□□□□ 0.37
ACTB-202ENST00000414620 CDCA3Q99618 268 aaPredicted RBP17.35■□□□□ 0.37
ACTB-202ENST00000414620 GBP3Q9H0R5 595 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 TTC12Q9H892 705 aaPredicted RBP17.35■□□□□ 0.37
ACTB-202ENST00000414620 MUTYHQ9UIF7 546 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 PCDHA12Q9UN75 941 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 PPME1Q9Y570 386 aa17.35■□□□□ 0.37
ACTB-202ENST00000414620 A0A087WWV3 80 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 POTEMA6NI47 508 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 SKIP12755 728 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 TECP42680 631 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 RAB27AP51159 221 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 SRGAP1Q7Z6B7 1085 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 FERMT3Q86UX7 667 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 TMEM173Q86WV6 379 aaPredicted RBP17.34■□□□□ 0.37
ACTB-202ENST00000414620 NRDE2Q9H7Z3 1164 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 XPNPEP1Q9NQW7 623 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 TBC1D13Q9NVG8 400 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 HCN4Q9Y3Q4 1203 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 PCDHB2Q9Y5E7 798 aa17.34■□□□□ 0.37
ACTB-202ENST00000414620 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.36
ACTB-202ENST00000414620 OFD1O75665 1012 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 MCM7P33993 719 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 ALDH7A1P49419 539 aaKnown RBP17.33■□□□□ 0.36
ACTB-202ENST00000414620 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.36
ACTB-202ENST00000414620 NOMO2Q5JPE7 1267 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 GLB1LQ6UWU2 654 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 RNF135Q8IUD6 432 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 EXOC8Q8IYI6 725 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 TMEM169Q96HH4 297 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 CCDC43Q96MW1 224 aaKnown RBP17.33■□□□□ 0.36
ACTB-202ENST00000414620 TRAIPQ9BWF2 469 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 NGRNQ9NPE2 291 aaKnown RBP17.33■□□□□ 0.36
ACTB-202ENST00000414620 DNAJB4Q9UDY4 337 aa17.33■□□□□ 0.36
ACTB-202ENST00000414620 GAS2O43903 313 aaKnown RBP17.32■□□□□ 0.36
ACTB-202ENST00000414620 B4GALT3O60512 393 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 ERLIN2O94905 339 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 SRGAP2BP0DMP2 458 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 RNASELQ05823 741 aaKnown RBP17.32■□□□□ 0.36
ACTB-202ENST00000414620 UBXN11Q5T124 520 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 ANKRD54Q6NXT1 300 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 AGMOQ6ZNB7 445 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 ASAP3Q8TDY4 903 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 PIGOQ8TEQ8 1089 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 BCL7CQ8WUZ0 217 aaPredicted RBP17.32■□□□□ 0.36
ACTB-202ENST00000414620 AUTS2Q8WXX7 1259 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 PGBD4Q96DM1 585 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 LIMCH1Q9UPQ0 1083 aa17.32■□□□□ 0.36
ACTB-202ENST00000414620 PLXNA3P51805 1871 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 FSD2A1L4K1 749 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 C2orf71A6NGG8 1288 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 PRR33A8MZF0 331 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 ZNF623O75123 536 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 AFF1P51825 1210 aaKnown RBP17.31■□□□□ 0.36
ACTB-202ENST00000414620 KCNC3Q14003 757 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 SAFBQ15424 915 aaKnown RBP eCLIP17.31■□□□□ 0.36
ACTB-202ENST00000414620 VPS52Q8N1B4 723 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 URGCPQ8TCY9 931 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 CPB2Q96IY4 423 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 RPGRIP1Q96KN7 1286 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 MTMR9Q96QG7 549 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 HSD17B14Q9BPX1 270 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
ACTB-202ENST00000414620 CDH22Q9UJ99 828 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms