RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 FAM105AQ9NUU6 356 aa27.35■■□□□ 1.97
AC005540.1-201ENST00000413911 OFD1O75665 1012 aa27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 PDGFBP01127 241 aaPredicted RBP27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 LETM2Q2VYF4 491 aa27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 SUGP1Q8IWZ8 645 aaKnown RBP27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 TMEM169Q96HH4 297 aa27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 VN1R3Q9BXE9 311 aa27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 KCNMB3Q9NPA1 279 aa27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 CYP26B1Q9NR63 512 aa27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 GJB4Q9NTQ9 266 aa27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 DNAJB4Q9UDY4 337 aa27.34■■□□□ 1.97
AC005540.1-201ENST00000413911 C2CD4DB7Z1M9 353 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 ZNF623O75123 536 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 GALTP07902 379 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 CA8P35219 290 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 PPP2R5CQ13362 524 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 TPRNQ4KMQ1 711 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 GALNT17Q6IS24 598 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 CATSPER4Q7RTX7 472 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 IGSF21Q96ID5 467 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 TM6SF1Q9BZW5 370 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 TSHZ2Q9NRE2 1034 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 INPP5FQ9Y2H2 1132 aa27.33■■□□□ 1.97
AC005540.1-201ENST00000413911 EPCAMP16422 314 aa27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 AFF1P51825 1210 aaKnown RBP27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 NOMO2Q5JPE7 1267 aa27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 KRT25Q7Z3Z0 450 aa27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 DDX53Q86TM3 631 aaKnown RBP27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 ZNF280BQ86YH2 543 aa27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 PHF20Q9BVI0 1012 aa27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 INO80BQ9C086 356 aaPredicted RBP27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 MINDY3Q9H8M7 445 aa27.32■■□□□ 1.96
AC005540.1-201ENST00000413911 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 EPB41L2O43491 1005 aaKnown RBP27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 QARSP47897 775 aaKnown RBP27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 SLC11A1P49279 550 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 ITIH3Q06033 890 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 SCRN1Q12765 414 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 RARS2Q5T160 578 aaKnown RBP27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 GLB1LQ6UWU2 654 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 AGMOQ6ZNB7 445 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 FAM177A1Q8N128 213 aaPredicted RBP27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 OXER1Q8TDS5 423 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 SLC22A17Q8WUG5 538 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 HAS1Q92839 578 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 SMOC2Q9H3U7 446 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 COL4A3BPQ9Y5P4 624 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 IRAK3Q9Y616 596 aa27.31■■□□□ 1.96
AC005540.1-201ENST00000413911 CTSAP10619 480 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 CES5AQ6NT32 575 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 KREMEN2Q8NCW0 462 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 TMEM143Q96AN5 459 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 GBP3Q9H0R5 595 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 DHX33Q9H6R0 707 aaKnown RBP27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 PDRG1Q9NUG6 133 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 AGPAT5Q9NUQ2 364 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 NR2E1Q9Y466 385 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 PCDHB2Q9Y5E7 798 aa27.3■■□□□ 1.96
AC005540.1-201ENST00000413911 DDHD2O94830 711 aa27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 SKIP12755 728 aa27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 AVPR2P30518 371 aa27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 HOXA11P31270 313 aaPredicted RBP27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 POLGP54098 1239 aaPredicted RBP27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 PTPN5P54829 565 aa27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 EARS2Q5JPH6 523 aaKnown RBP27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 UBXN11Q5T124 520 aa27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 PRPF31Q8WWY3 499 aaKnown RBP27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 FAM20AQ96MK3 541 aa27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 NECTIN4Q96NY8 510 aa27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 BMP2KQ9NSY1 1161 aaPredicted RBP27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 MYO10Q9HD67 2058 aa27.29■■□□□ 1.96
AC005540.1-201ENST00000413911 ZBTB39O15060 712 aa27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 BRD1O95696 1058 aa27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 RAB27AP51159 221 aa27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 PPP4R3AQ6IN85 833 aa27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 CPLX2Q6PUV4 134 aaKnown RBP27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 MRPL10Q7Z7H8 261 aaKnown RBP27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 NEK8Q86SG6 692 aa27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 ZBTB33Q86T24 672 aa27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 CEP170P1Q96L14 293 aa27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 JPH2Q9BR39 696 aaPredicted RBP27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 SLKQ9H2G2 1235 aaPredicted RBP27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 RGL1Q9NZL6 768 aa27.28■■□□□ 1.96
AC005540.1-201ENST00000413911 CCDC194A0A1B0GVG4 234 aa27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 P4HBP07237 508 aaKnown RBP27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 SRGAP2CP0DJJ0 459 aa27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 RNASELQ05823 741 aaKnown RBP27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 PTPN14Q15678 1187 aa27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 SLC7A3Q8WY07 619 aa27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 RSPH1Q8WYR4 309 aa27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 RIPOR3Q96MK2 946 aa27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 MYO15AQ9UKN7 3530 aa27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 CACNA1HO95180 2353 aa27.27■■□□□ 1.96
AC005540.1-201ENST00000413911 FAM205CA6NFA0 338 aa27.26■■□□□ 1.95
AC005540.1-201ENST00000413911 ASGR2P07307 311 aa27.26■■□□□ 1.95
AC005540.1-201ENST00000413911 MTHFRP42898 656 aa27.26■■□□□ 1.95
AC005540.1-201ENST00000413911 SPIRE1Q08AE8 756 aa27.26■■□□□ 1.95
AC005540.1-201ENST00000413911 LAMTOR4Q0VGL1 99 aa27.26■■□□□ 1.95
AC005540.1-201ENST00000413911 PIK3AP1Q6ZUJ8 805 aa27.26■■□□□ 1.95
AC005540.1-201ENST00000413911 LXNQ9BS40 222 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms