RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 ERLIN2O94905 339 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 F13A1P00488 732 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 ZSCAN22P10073 491 aaPredicted RBP11.16□□□□□ -0.62
TMEM248-202ENST00000413593 FGFR1P11362 822 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 ATF7P17544 494 aaPredicted RBP11.16□□□□□ -0.62
TMEM248-202ENST00000413593 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
TMEM248-202ENST00000413593 HOXA11P31270 313 aaPredicted RBP11.16□□□□□ -0.62
TMEM248-202ENST00000413593 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
TMEM248-202ENST00000413593 MBTD1Q05BQ5 628 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 PKP1Q13835 747 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 SLC39A14Q15043 492 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 AMHR2Q16671 573 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 PAN2Q504Q3 1202 aaKnown RBP11.16□□□□□ -0.62
TMEM248-202ENST00000413593 EPC2Q52LR7 807 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 CDCA2Q69YH5 1023 aaPredicted RBP11.16□□□□□ -0.62
TMEM248-202ENST00000413593 RINT1Q6NUQ1 792 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 RNF169Q8NCN4 708 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 FBXO22Q8NEZ5 403 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 GDPD5Q8WTR4 605 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 KIFAP3Q92845 792 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 CSRNP2Q9H175 543 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 POLD4Q9HCU8 107 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 FAM105AQ9NUU6 356 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 RNF19AQ9NV58 838 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 SRPRBQ9Y5M8 271 aaKnown RBP11.16□□□□□ -0.62
TMEM248-202ENST00000413593 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
TMEM248-202ENST00000413593 ARID2Q68CP9 1835 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 TBKBP1A7MCY6 615 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 C5orf67F2Z3F1 127 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 HOXA2O43364 376 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 GTPBP6O43824 516 aaPredicted RBP11.15□□□□□ -0.62
TMEM248-202ENST00000413593 ZNF623O75123 536 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 EOMESO95936 686 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 CTNNB1P35222 781 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 BMPR1AP36894 532 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 NAMPTP43490 491 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 RAB27AP51159 221 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 KARSQ15046 597 aaKnown RBP11.15□□□□□ -0.62
TMEM248-202ENST00000413593 PPP2R5AQ15172 486 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 UBXN11Q5T124 520 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 FOXD4L5Q5VV16 416 aaPredicted RBP11.15□□□□□ -0.62
TMEM248-202ENST00000413593 C1orf186Q6ZWK4 172 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 DAW1Q8N136 415 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 SYT2Q8N9I0 419 aaPredicted RBP11.15□□□□□ -0.62
TMEM248-202ENST00000413593 FOXD4L4Q8WXT5 416 aaPredicted RBP11.15□□□□□ -0.62
TMEM248-202ENST00000413593 CALML4Q96GE6 196 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 ZNF396Q96N95 335 aaPredicted RBP11.15□□□□□ -0.62
TMEM248-202ENST00000413593 CCSER1Q9C0I3 900 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 TMEM117Q9H0C3 514 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 RWDD3Q9Y3V2 267 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 MTCH2Q9Y6C9 303 aa11.15□□□□□ -0.62
TMEM248-202ENST00000413593 H3BNC9 293 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 B4GALT5O43286 388 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 HIP1RO75146 1068 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 SSBP05455 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
TMEM248-202ENST00000413593 RB1P06400 928 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 PLA2G4BP0C869 781 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 SKIP12755 728 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 PLCG1P19174 1290 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 GUCY2CP25092 1073 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 AXLP30530 894 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 SLC12A3P55017 1021 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 MAPK7Q13164 816 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 GPM6BQ13491 265 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 STK38Q15208 465 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 CLLU1OSQ5K130 101 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 SPECC1Q5M775 1068 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 USP49Q70CQ1 688 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 ZBTB8OSQ8IWT0 167 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 ABI1Q8IZP0 508 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
TMEM248-202ENST00000413593 LINC00301Q8NCQ3 95 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 RASSF8Q8NHQ8 419 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 DEPTORQ8TB45 409 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 LRRC15Q8TF66 581 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
TMEM248-202ENST00000413593 LPPQ93052 612 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 CCDC51Q96ER9 411 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 EPSTI1Q96J88 318 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 IFT74Q96LB3 600 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 CLIC6Q96NY7 704 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 CASD1Q96PB1 797 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 C11orf84Q9BUA3 381 aaPredicted RBP11.14□□□□□ -0.63
TMEM248-202ENST00000413593 TIPINQ9BVW5 301 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 C2orf40Q9H1Z8 148 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 FZD8Q9H461 694 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 BLOC1S4Q9NUP1 217 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 TYW1Q9NV66 732 aaKnown RBP11.14□□□□□ -0.63
TMEM248-202ENST00000413593 PRMT7Q9NVM4 692 aaPredicted RBP11.14□□□□□ -0.63
TMEM248-202ENST00000413593 LMCD1Q9NZU5 365 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 TFIP11Q9UBB9 837 aaKnown RBP11.14□□□□□ -0.63
TMEM248-202ENST00000413593 HCSTQ9UBK5 93 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 PCDHB2Q9Y5E7 798 aa11.14□□□□□ -0.63
TMEM248-202ENST00000413593 MEIS3P2A8K0S8 358 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 SPTLC2O15270 562 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 YEATS4O95619 227 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 ARF4P18085 180 aaPredicted RBP11.13□□□□□ -0.63
TMEM248-202ENST00000413593 NCBP1Q09161 790 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms