RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 KRT13P13646 458 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 COPB2P35606 906 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 KCNA1Q09470 495 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 ADAT2Q7Z6V5 191 aaKnown RBP19.03■□□□□ 0.64
SDCBP-202ENST00000413219 PRELID2Q8N945 189 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 MORC4Q8TE76 937 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 RPGRQ92834 1020 aaKnown RBP19.03■□□□□ 0.64
SDCBP-202ENST00000413219 RPS6KC1Q96S38 1066 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 ROPN1BQ9BZX4 212 aaPredicted RBP19.03■□□□□ 0.64
SDCBP-202ENST00000413219 ROPN1Q9HAT0 212 aaPredicted RBP19.03■□□□□ 0.64
SDCBP-202ENST00000413219 DDX4Q9NQI0 724 aaKnown RBP19.03■□□□□ 0.64
SDCBP-202ENST00000413219 DMAC2Q9NW81 257 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 SUFUQ9UMX1 484 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 PCDHA3Q9Y5H8 950 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 ALG6Q9Y672 507 aa19.03■□□□□ 0.64
SDCBP-202ENST00000413219 FAM13AO94988 1023 aa19.02■□□□□ 0.64
SDCBP-202ENST00000413219 RARGP13631 454 aa19.02■□□□□ 0.64
SDCBP-202ENST00000413219 RPL21P46778 160 aaKnown RBP19.02■□□□□ 0.64
SDCBP-202ENST00000413219 IFI35P80217 286 aaPredicted RBP19.02■□□□□ 0.64
SDCBP-202ENST00000413219 RINT1Q6NUQ1 792 aa19.02■□□□□ 0.64
SDCBP-202ENST00000413219 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
SDCBP-202ENST00000413219 SEMA4AQ9H3S1 761 aa19.02■□□□□ 0.64
SDCBP-202ENST00000413219 SEL1LQ9UBV2 794 aa19.02■□□□□ 0.64
SDCBP-202ENST00000413219 CYP1B1Q16678 543 aa19.02■□□□□ 0.63
SDCBP-202ENST00000413219 KCTD19Q17RG1 926 aaPredicted RBP19.02■□□□□ 0.63
SDCBP-202ENST00000413219 CERKQ8TCT0 537 aa19.02■□□□□ 0.63
SDCBP-202ENST00000413219 MKL1Q969V6 931 aa19.02■□□□□ 0.63
SDCBP-202ENST00000413219 C18orf8Q96DM3 657 aa19.02■□□□□ 0.63
SDCBP-202ENST00000413219 AGPAT1Q99943 283 aa19.02■□□□□ 0.63
SDCBP-202ENST00000413219 ELAC2Q9BQ52 826 aaKnown RBP19.02■□□□□ 0.63
SDCBP-202ENST00000413219 EIF2AK1Q9BQI3 630 aaKnown RBP19.02■□□□□ 0.63
SDCBP-202ENST00000413219 ZSWIM1Q9BR11 485 aa19.02■□□□□ 0.63
SDCBP-202ENST00000413219 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.02■□□□□ 0.63
SDCBP-202ENST00000413219 FAM86B1E9PN63 330 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 RASGRF2O14827 1237 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 RIPK2O43353 540 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 FAM86B2P0C5J1 330 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 PDE6CP51160 858 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 CTTNQ14247 550 aaKnown RBP19.01■□□□□ 0.63
SDCBP-202ENST00000413219 CRYMQ14894 314 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 CNGA2Q16280 664 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 STXBP4Q6ZWJ1 553 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 CYFIP1Q7L576 1253 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 HS2ST1Q7LGA3 356 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 P2RX7Q99572 595 aaKnown RBP19.01■□□□□ 0.63
SDCBP-202ENST00000413219 PRMT1Q99873 361 aaKnown RBP19.01■□□□□ 0.63
SDCBP-202ENST00000413219 TAS2R14Q9NYV8 317 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 FRMD4BQ9Y2L6 1034 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 MPHOSPH10O00566 681 aaKnown RBP19.01■□□□□ 0.63
SDCBP-202ENST00000413219 MSH4O15457 936 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 HLA-DOAP06340 250 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 VIMP08670 466 aaKnown RBP19.01■□□□□ 0.63
SDCBP-202ENST00000413219 MYL7Q01449 175 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 E2F5Q15329 346 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 CRY2Q49AN0 593 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 CBWD6Q4V339 395 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 CBWD3Q5JTY5 395 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 CBWD5Q5RIA9 395 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 MIEF2Q96C03 454 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 HOOK2Q96ED9 719 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 AMNQ9BXJ7 453 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 TUFT1Q9NNX1 390 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 HOMER3Q9NSC5 361 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 TMOD4Q9NZQ9 345 aa19.01■□□□□ 0.63
SDCBP-202ENST00000413219 SNX3O60493 162 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 MTA2O94776 668 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 OAS1P00973 400 aaKnown RBP19■□□□□ 0.63
SDCBP-202ENST00000413219 CYP4A11Q02928 519 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 AUHQ13825 339 aaKnown RBP19■□□□□ 0.63
SDCBP-202ENST00000413219 SEL1L2Q5TEA6 688 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 TRMT10CQ7L0Y3 403 aaKnown RBP19■□□□□ 0.63
SDCBP-202ENST00000413219 MYCT1Q8N699 235 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 ART4Q93070 314 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 EBF2Q9HAK2 575 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 PARVGQ9HBI0 331 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 NYAP2Q9P242 653 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 BAIAP2L1Q9UHR4 511 aa19■□□□□ 0.63
SDCBP-202ENST00000413219 A0A1B0GUA9 196 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 CYP3A4P08684 503 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 BCRP11274 1271 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 NMT1P30419 496 aaKnown RBP18.99■□□□□ 0.63
SDCBP-202ENST00000413219 ZNF268Q14587 947 aaPredicted RBP18.99■□□□□ 0.63
SDCBP-202ENST00000413219 CCDC137Q6PK04 289 aaKnown RBP18.99■□□□□ 0.63
SDCBP-202ENST00000413219 C1orf186Q6ZWK4 172 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 GBP7Q8N8V2 638 aaPredicted RBP18.99■□□□□ 0.63
SDCBP-202ENST00000413219 TBC1D16Q8TBP0 767 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 WNT8AQ9H1J5 351 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 SEPT11Q9NVA2 429 aaKnown RBP18.99■□□□□ 0.63
SDCBP-202ENST00000413219 CTTNBP2NLQ9P2B4 639 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 MTUS1Q9ULD2 1270 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 QSER1Q2KHR3 1735 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 PEX5P50542 639 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 ZNF131P52739 623 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 GPC5P78333 572 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 MYBPC2Q14324 1141 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 TTC27Q6P3X3 843 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 PALB2Q86YC2 1186 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 SLC9A9Q8IVB4 645 aa18.99■□□□□ 0.63
SDCBP-202ENST00000413219 EPS8L3Q8TE67 593 aaKnown RBP18.99■□□□□ 0.63
SDCBP-202ENST00000413219 PLCD4Q9BRC7 762 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms