RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 NECTIN4Q96NY8 510 aa20.91■□□□□ 0.94
ITGA6-204ENST00000412899 JPH2Q9BR39 696 aaPredicted RBP20.91■□□□□ 0.94
ITGA6-204ENST00000412899 FAM105AQ9NUU6 356 aa20.91■□□□□ 0.94
ITGA6-204ENST00000412899 INPP5FQ9Y2H2 1132 aa20.91■□□□□ 0.94
ITGA6-204ENST00000412899 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.9■□□□□ 0.94
ITGA6-204ENST00000412899 M0R2N6 131 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 RAB27AP51159 221 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 RNASELQ05823 741 aaKnown RBP20.9■□□□□ 0.94
ITGA6-204ENST00000412899 NOMO2Q5JPE7 1267 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 ANO5Q75V66 913 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 KRT25Q7Z3Z0 450 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 KSR1Q8IVT5 923 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 AIFM3Q96NN9 605 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 ZBP1Q9H171 429 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 POMKQ9H5K3 350 aa20.9■□□□□ 0.94
ITGA6-204ENST00000412899 PFKFB2O60825 505 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 DKC1O60832 514 aaKnown RBP eCLIP20.89■□□□□ 0.93
ITGA6-204ENST00000412899 MTHFRP42898 656 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 SCRN1Q12765 414 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 GIT2Q14161 759 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 LETM2Q2VYF4 491 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 PLA2G4FQ68DD2 849 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 TMEM173Q86WV6 379 aaPredicted RBP20.89■□□□□ 0.93
ITGA6-204ENST00000412899 FAM177A1Q8N128 213 aaPredicted RBP20.89■□□□□ 0.93
ITGA6-204ENST00000412899 AUTS2Q8WXX7 1259 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 RIPOR3Q96MK2 946 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 PHOX2BQ99453 314 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 GBP3Q9H0R5 595 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 NRDE2Q9H7Z3 1164 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 CYP26B1Q9NR63 512 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 TBC1D13Q9NVG8 400 aa20.89■□□□□ 0.93
ITGA6-204ENST00000412899 C2CD4DB7Z1M9 353 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 EML1O00423 815 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 ZNF623O75123 536 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 CDKL5O76039 1030 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 AVPR2P30518 371 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 QARSP47897 775 aaKnown RBP20.88■□□□□ 0.93
ITGA6-204ENST00000412899 POLGP54098 1239 aaPredicted RBP20.88■□□□□ 0.93
ITGA6-204ENST00000412899 VCPP55072 806 aaKnown RBP20.88■□□□□ 0.93
ITGA6-204ENST00000412899 NPY5RQ15761 445 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 RARS2Q5T160 578 aaKnown RBP20.88■□□□□ 0.93
ITGA6-204ENST00000412899 DDX53Q86TM3 631 aaKnown RBP20.88■□□□□ 0.93
ITGA6-204ENST00000412899 KREMEN2Q8NCW0 462 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 SLC7A3Q8WY07 619 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 PGBD4Q96DM1 585 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 IGSF21Q96ID5 467 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 DZANK1Q9NVP4 752 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 KCNJ14Q9UNX9 436 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 SORCS3Q9UPU3 1222 aa20.88■□□□□ 0.93
ITGA6-204ENST00000412899 CCDC194A0A1B0GVG4 234 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 MEIS3P2A8K0S8 358 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 SLC37A4O43826 429 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 OFD1O75665 1012 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 GALTP07902 379 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 WEE2P0C1S8 567 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 CTSAP10619 480 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 NPEPPSP55786 919 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 TCF15Q12870 199 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 MTMR3Q13615 1198 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 ATAT1Q5SQI0 421 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 C12orf76Q8N812 135 aaPredicted RBP20.87■□□□□ 0.93
ITGA6-204ENST00000412899 CEP170P1Q96L14 293 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 IFT122Q9HBG6 1241 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 COL4A3BPQ9Y5P4 624 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 IRAK3Q9Y616 596 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 PIEZO1Q92508 2521 aa20.87■□□□□ 0.93
ITGA6-204ENST00000412899 MARCH6O60337 910 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 EPCAMP16422 314 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 PPP2R5CQ13362 524 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 NEK8Q86SG6 692 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 EXOC8Q8IYI6 725 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 URGCPQ8TCY9 931 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 FAM20AQ96MK3 541 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 AGPAT5Q9NUQ2 364 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 DNAJB4Q9UDY4 337 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 DBR1Q9UK59 544 aaKnown RBP20.86■□□□□ 0.93
ITGA6-204ENST00000412899 PCDHB2Q9Y5E7 798 aa20.86■□□□□ 0.93
ITGA6-204ENST00000412899 SPDYE4A6NLX3 237 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 P4HBP07237 508 aaKnown RBP20.85■□□□□ 0.93
ITGA6-204ENST00000412899 SRGAP2CP0DJJ0 459 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 XBP1P17861 261 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 SLC11A1P49279 550 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 ME3Q16798 604 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 KANK3Q6NY19 840 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 UBALD2Q8IYN6 164 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 NECAB1Q8N987 351 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 BCL7CQ8WUZ0 217 aaPredicted RBP20.85■□□□□ 0.93
ITGA6-204ENST00000412899 PSPC1Q8WXF1 523 aaKnown RBP20.85■□□□□ 0.93
ITGA6-204ENST00000412899 KCNMB3Q9NPA1 279 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 VAV3Q9UKW4 847 aa20.85■□□□□ 0.93
ITGA6-204ENST00000412899 KMT2EQ8IZD2 1858 aa20.84■□□□□ 0.93
ITGA6-204ENST00000412899 CCNT1O60563 726 aaKnown RBP20.84■□□□□ 0.93
ITGA6-204ENST00000412899 PDGFBP01127 241 aaPredicted RBP20.84■□□□□ 0.93
ITGA6-204ENST00000412899 GCFC2P16383 781 aaKnown RBP20.84■□□□□ 0.93
ITGA6-204ENST00000412899 PPP4R3AQ6IN85 833 aa20.84■□□□□ 0.93
ITGA6-204ENST00000412899 KIAA1841Q6NSI8 718 aa20.84■□□□□ 0.93
ITGA6-204ENST00000412899 AGMOQ6ZNB7 445 aa20.84■□□□□ 0.93
ITGA6-204ENST00000412899 SRGAP1Q7Z6B7 1085 aa20.84■□□□□ 0.93
ITGA6-204ENST00000412899 CABP7Q86V35 215 aa20.84■□□□□ 0.93
ITGA6-204ENST00000412899 PPFIBP1Q86W92 1011 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms