RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PTDSS1P48651 473 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 FXR1P51114 621 aaKnown RBP eCLIP5.6□□□□□ -1.51
HERC4-205ENST00000412272 DHX9Q08211 1270 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 ESCO1Q5FWF5 840 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 SPOPLQ6IQ16 392 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 LARP1Q6PKG0 1096 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 RTL10Q7L3V2 364 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 SPATA24Q86W54 205 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 ARHGAP24Q8N264 748 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 CCDC89Q8N998 374 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 CDC26Q8NHZ8 85 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 SLC7A3Q8WY07 619 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 ARHGEF2Q92974 986 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 GDAP1L1Q96MZ0 367 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 LPIN3Q9BQK8 851 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 NUP85Q9BW27 656 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 TRPV6Q9H1D0 765 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 NEK6Q9HC98 313 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 POLD4Q9HCU8 107 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 GPHNQ9NQX3 736 aaPredicted RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 MBIPQ9NS73 344 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 FARSBQ9NSD9 589 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 HBS1LQ9Y450 684 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 NCAPD2Q15021 1401 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 POGZQ7Z3K3 1410 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 COL22A1Q8NFW1 1626 aaPredicted RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 CCT8L1PA6NM43 557 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 CBFA2T3O75081 653 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 GUCY1B2O75343 617 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 TCEA1P23193 301 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 LIFRP42702 1097 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 CCT4P50991 539 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 MARSP56192 900 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 CDK18Q07002 472 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 GALNT1Q10472 559 aaPredicted RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 SMARCB1Q12824 385 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 POLA2Q14181 598 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 NAALADL2Q58DX5 795 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 TMC7Q7Z402 723 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 NOP9Q86U38 636 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 FAM83AQ86UY5 434 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 ZBED8Q8IZ13 594 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 NLGN1Q8N2Q7 840 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 SLC22A8Q8TCC7 542 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 SH3RF3Q8TEJ3 882 aaPredicted RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 CFAP36Q96G28 342 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 DNAJC1Q96KC8 554 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 AIFM3Q96NN9 605 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 SAMD11Q96NU1 681 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 C8orf4Q9NR00 106 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 ABI2Q9NYB9 513 aaPredicted RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 ZBTB21Q9ULJ3 1066 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 PCDHGA3Q9Y5H0 932 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 ANO9A1A5B4 782 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 LACTBL1A8MY62 500 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 IDH3BO43837 385 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 KCNA3P22001 575 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 SERPINB3P29508 390 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 MRPS25P82663 173 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 RELQ04864 619 aaPredicted RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 ITIH4Q14624 930 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 PTPN21Q16825 1174 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 ZNF423Q2M1K9 1284 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 SHEQ5VZ18 495 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 TSPYL6Q8N831 410 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 RIN3Q8TB24 985 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 STON2Q8WXE9 905 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 GFM2Q969S9 779 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 GPATCH1Q9BRR8 931 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 NIFKQ9BYG3 293 aaKnown RBP5.6□□□□□ -1.51
HERC4-205ENST00000412272 HPS4Q9NQG7 708 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 RWDD3Q9Y3V2 267 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 C4AP0C0L4 1744 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 C4BP0C0L5 1744 aa5.6□□□□□ -1.51
HERC4-205ENST00000412272 TRAPPC3O43617 180 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 YEATS4O95619 227 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 LMNAP02545 664 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 MTHFRP42898 656 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 ARHGDIBP52566 201 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 ZNF135P52742 658 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 EPHB4P54760 987 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 DCTN2Q13561 401 aaKnown RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 TOB2Q14106 344 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 NR1I3Q14994 352 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 PHKG1Q16816 387 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 TNNI3KQ59H18 835 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 FAM26DQ5JW98 314 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 NT5DC1Q5TFE4 455 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 LRIG3Q6UXM1 1119 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 GLRX5Q86SX6 157 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 CACNA2D3Q8IZS8 1091 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 USHBP1Q8N6Y0 703 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 ANKS4BQ8N8V4 417 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 C12orf50Q8NA57 414 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 GOT1L1Q8NHS2 421 aaPredicted RBP5.59□□□□□ -1.51
HERC4-205ENST00000412272 ASAP3Q8TDY4 903 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 RUFY2Q8WXA3 655 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 DPF2Q92785 391 aa5.59□□□□□ -1.51
HERC4-205ENST00000412272 EFHD2Q96C19 240 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms