RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 ACRBPQ8NEB7 543 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 ACTRT2Q8TDY3 377 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 UROC1Q96N76 676 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 CRBNQ96SW2 442 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 CPPED1Q9BRF8 314 aaPredicted RBP1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 SPON2Q9BUD6 331 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 AMNQ9BXJ7 453 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 HAPLN2Q9GZV7 340 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 GPR27Q9NS67 375 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 FOXJ2Q9P0K8 574 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 BTBD7Q9P203 1132 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 BTBD3Q9Y2F9 522 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 CHST2Q9Y4C5 530 aa1.76□□□□□ -2.13
RNU6-554P-201ENST00000410466 PRAMEF25A6NGN4 478 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 FAM90A27PA6NNH2 459 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 TBX1O43435 398 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 STC2O76061 302 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 TOX4O94842 621 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 MPIG6BO95866 241 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 JUNP05412 331 aaKnown RBP1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 SPATA31D3P0C874 917 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 GPD1P21695 349 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 GFRA1P56159 465 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 SLC10A2Q12908 348 aaPredicted RBP1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 LAMB3Q13751 1172 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 LLGL1Q15334 1064 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 SF1Q15637 639 aaKnown RBP1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 SPATA31D4Q6ZUB0 917 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 NLGN4XQ8N0W4 816 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 TMEM145Q8NBT3 493 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 FBXO18Q8NFZ0 1043 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 OR52N2Q8NGI0 321 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 SLC7A14Q8TBB6 771 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 ADAM2Q99965 735 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 IL17RBQ9NRM6 502 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 UCKL1Q9NWZ5 548 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 SAE1Q9UBE0 346 aaPredicted RBP1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 DENND2AQ9ULE3 1009 aa1.75□□□□□ -2.13
RNU6-554P-201ENST00000410466 DIRC3C9JPN6 131 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 PPEF2O14830 753 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 MAFO75444 373 aaPredicted RBP1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 CKBP12277 381 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 PLCD1P51178 756 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 RNASE9P60153 205 aaKnown RBP1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 HERVK_113P62684 666 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 PDE4CQ08493 712 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 KIZQ2M2Z5 673 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 FAM214AQ32MH5 1076 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 ZNF227Q86WZ6 799 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 CMTM4Q8IZR5 234 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 BCL6BQ8N143 479 aaPredicted RBP1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 SARAFQ96BY9 339 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 PDLIM2Q96JY6 352 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 Q96MF0 132 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 PDCD2LQ9BRP1 358 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 CPEB1Q9BZB8 566 aaKnown RBP1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 EPC1Q9H2F5 836 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 ELOVL5Q9NYP7 299 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 SRPK3Q9UPE1 567 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 ICKQ9UPZ9 632 aa1.74□□□□□ -2.13
RNU6-554P-201ENST00000410466 WNT9AO14904 365 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 MSCO60682 206 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 FOSP01100 380 aaPredicted RBP1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 ZSCAN20P17040 1043 aaPredicted RBP1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 APEX1P27695 318 aaKnown RBP1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 GRM1Q13255 1194 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 SLC35F1Q5T1Q4 408 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 ARMC6Q6NXE6 501 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 EP400NLQ6ZTU2 488 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 NR4A3Q92570 626 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 C1orf159Q96HA4 380 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 PHF20Q9BVI0 1012 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 CPNE5Q9HCH3 593 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 LRP2BPQ9P2M1 347 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 ATP23Q9Y6H3 246 aa1.73□□□□□ -2.13
RNU6-554P-201ENST00000410466 LEFTY2O00292 366 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 DNAJC6O75061 913 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 CDKL5O76039 1030 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 NR4A2P43354 598 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 RESTQ13127 1097 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 PPP2R5EQ16537 467 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 FCRLBQ6BAA4 426 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 CCDC81Q6ZN84 652 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 FAM83AQ86UY5 434 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 SYT12Q8IV01 421 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 PLA2G15Q8NCC3 412 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 CALML6Q8TD86 181 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 SH3RF2Q8TEC5 729 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 CTAGE1Q96RT6 745 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 TEX101Q9BY14 249 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 SEMA4CQ9C0C4 833 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 C14orf93Q9H972 538 aaKnown RBP1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 ACSS2Q9NR19 701 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 HDAC5Q9UQL6 1122 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 MAP3K2Q9Y2U5 619 aa1.72□□□□□ -2.13
RNU6-554P-201ENST00000410466 FAM221BA6H8Z2 402 aa1.71□□□□□ -2.14
RNU6-554P-201ENST00000410466 MARCH11A6NNE9 402 aa1.71□□□□□ -2.14
RNU6-554P-201ENST00000410466 FAM47E-STBD1D6RA91 191 aa1.71□□□□□ -2.14
RNU6-554P-201ENST00000410466 NHLH2Q02577 135 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms