RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 SKIP12755 728 aa19.87■□□□□ 0.77
PDLIM2-206ENST00000409141 MARCKSP29966 332 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-206ENST00000409141 GRIN1Q05586 938 aa19.87■□□□□ 0.77
PDLIM2-206ENST00000409141 MBTD1Q05BQ5 628 aa19.87■□□□□ 0.77
PDLIM2-206ENST00000409141 ABI1Q8IZP0 508 aa19.87■□□□□ 0.77
PDLIM2-206ENST00000409141 CALML4Q96GE6 196 aa19.87■□□□□ 0.77
PDLIM2-206ENST00000409141 NFKBIZQ9BYH8 718 aa19.87■□□□□ 0.77
PDLIM2-206ENST00000409141 H3BNC9 293 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 SSBP05455 408 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 RB1P06400 928 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 HOXA11P31270 313 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 GPM6BQ13491 265 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 SPOUT1Q5T280 376 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 ZNF598Q86UK7 904 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 KIFAP3Q92845 792 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 USP28Q96RU2 1077 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 TMEM117Q9H0C3 514 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 LMCD1Q9NZU5 365 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 SLC26A4O43511 780 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 TSPAN1O60635 241 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 LINC00271P0C7V0 271 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 ZSCAN22P10073 491 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 AXLP30530 894 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 RAB27AP51159 221 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 PPP2R5AQ15172 486 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 RINT1Q6NUQ1 792 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 ZBTB8OSQ8IWT0 167 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 RASSF8Q8NHQ8 419 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 BSNDQ8WZ55 320 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 IFT74Q96LB3 600 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 CASD1Q96PB1 797 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 FAM105AQ9NUU6 356 aa19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 TYW1Q9NV66 732 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 SRPRBQ9Y5M8 271 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-206ENST00000409141 C5orf67F2Z3F1 127 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 ZNF623O75123 536 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 ATF7P17544 494 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 NAMPTP43490 491 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 SLC39A14Q15043 492 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 LONRF3Q496Y0 759 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 TMEM119Q4V9L6 283 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 DEPTORQ8TB45 409 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 ZNF396Q96N95 335 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 C11orf84Q9BUA3 381 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 RUSC1Q9BVN2 902 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 PLVAPQ9BX97 442 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 CSRNP2Q9H175 543 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 RNF19AQ9NV58 838 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 PCDHB2Q9Y5E7 798 aa19.85■□□□□ 0.77
PDLIM2-206ENST00000409141 PRRC2BQ5JSZ5 2229 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 PLA2G4BP0C869 781 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 AMHR2Q16671 573 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 PTPROQ16827 1216 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 CLLU1OSQ5K130 101 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 SPECC1Q5M775 1068 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 CDCA2Q69YH5 1023 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 NOTUMQ6P988 496 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 C1orf186Q6ZWK4 172 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 SYT2Q8N9I0 419 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 SLC17A8Q8NDX2 589 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 HELQQ8TDG4 1101 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 LPPQ93052 612 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 PGBD4Q96DM1 585 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 CPB2Q96IY4 423 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 C2orf40Q9H1Z8 148 aa19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 TFIP11Q9UBB9 837 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 FBXO2Q9UK22 296 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-206ENST00000409141 COL6A3P12111 3177 aa19.83■□□□□ 0.77
PDLIM2-206ENST00000409141 TRANK1O15050 2925 aa19.83■□□□□ 0.77
PDLIM2-206ENST00000409141 HIP1RO75146 1068 aa19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 KARSQ15046 597 aaKnown RBP19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 STK38Q15208 465 aa19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 UBXN11Q5T124 520 aa19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 DRC1Q96MC2 740 aa19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 CLIC6Q96NY7 704 aa19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 AAASQ9NRG9 546 aa19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 PRMT7Q9NVM4 692 aaPredicted RBP19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 PCDHB12Q9Y5F1 795 aa19.83■□□□□ 0.76
PDLIM2-206ENST00000409141 B4GALT5O43286 388 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 F13A1P00488 732 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 ARF4P18085 180 aaPredicted RBP19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 LIG1P18858 919 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 NASPP49321 788 aaPredicted RBP19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 NAALADL2Q58DX5 795 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 MRPL10Q7Z7H8 261 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 P2RX5Q93086 422 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 MRPL38Q96DV4 380 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 CCDC51Q96ER9 411 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 EPSTI1Q96J88 318 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 TIPINQ9BVW5 301 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 CCSER1Q9C0I3 900 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 FZD8Q9H461 694 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 HCSTQ9UBK5 93 aa19.82■□□□□ 0.76
PDLIM2-206ENST00000409141 CCDC169A6NNP5 214 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 GRM6O15303 877 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 PLCG1P19174 1290 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 GUCY2CP25092 1073 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 EFNA5P52803 228 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 SLC12A3P55017 1021 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 PEX3P56589 373 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms