RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 ECM1Q16610 540 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 PTPROQ16827 1216 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 HAUS3Q68CZ6 603 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 SRGAP1Q7Z6B7 1085 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 ECHDC2Q86YB7 292 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 CRIPAKQ8N1N5 446 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 SNX29Q8TEQ0 813 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 POLR3FQ9H1D9 316 aaPredicted RBP11.5□□□□□ -0.57
FAM49A-202ENST00000406434 RC3H2Q9HBD1 1191 aaKnown RBP11.5□□□□□ -0.57
FAM49A-202ENST00000406434 IFT122Q9HBG6 1241 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 XPNPEP1Q9NQW7 623 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 CHST12Q9NRB3 414 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 TMEM161AQ9NX61 479 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 DACT1Q9NYF0 836 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 PIN4Q9Y237 131 aaKnown RBP11.5□□□□□ -0.57
FAM49A-202ENST00000406434 CDH23Q9H251 3354 aa11.5□□□□□ -0.57
FAM49A-202ENST00000406434 NLRC5Q86WI3 1866 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 TRANK1O15050 2925 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 PP2D1A8MPX8 630 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 K7ELQ4 463 aaPredicted RBP11.49□□□□□ -0.57
FAM49A-202ENST00000406434 LAD1O00515 517 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 RB1P06400 928 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 PDCP20941 246 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 ARL2P36404 184 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 MLLT3P42568 568 aaPredicted RBP11.49□□□□□ -0.57
FAM49A-202ENST00000406434 PHKA2P46019 1235 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 TFDP1Q14186 410 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 MXD4Q14582 209 aaPredicted RBP11.49□□□□□ -0.57
FAM49A-202ENST00000406434 KRT79Q5XKE5 535 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 ASAP3Q8TDY4 903 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 CLP1Q92989 425 aaKnown RBP11.49□□□□□ -0.57
FAM49A-202ENST00000406434 ELAC1Q9H777 363 aaKnown RBP11.49□□□□□ -0.57
FAM49A-202ENST00000406434 MINDY3Q9H8M7 445 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 POLD4Q9HCU8 107 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 ALG13Q9NP73 1137 aaKnown RBP11.49□□□□□ -0.57
FAM49A-202ENST00000406434 GPRC5CQ9NQ84 441 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 DDX19AQ9NUU7 478 aaKnown RBP11.49□□□□□ -0.57
FAM49A-202ENST00000406434 LMCD1Q9NZU5 365 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 DBR1Q9UK59 544 aaKnown RBP11.49□□□□□ -0.57
FAM49A-202ENST00000406434 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
FAM49A-202ENST00000406434 A0A0U1RQF3 1178 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 VWA3AA6NCI4 1184 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 INO80B-WBP1J3KQ70 363 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 GRM6O15303 877 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 ERLIN2O94905 339 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 GLRA2P23416 452 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 PRPHP41219 470 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 NCBP1Q09161 790 aaKnown RBP11.48□□□□□ -0.57
FAM49A-202ENST00000406434 PADI6Q6TGC4 694 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 PLIN2Q99541 437 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 C11orf84Q9BUA3 381 aaPredicted RBP11.48□□□□□ -0.57
FAM49A-202ENST00000406434 TYW1Q9NV66 732 aaKnown RBP11.48□□□□□ -0.57
FAM49A-202ENST00000406434 DNM3Q9UQ16 869 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 ARID2Q68CP9 1835 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 MYO7AQ13402 2215 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 PRUNE2Q8WUY3 3088 aa11.48□□□□□ -0.57
FAM49A-202ENST00000406434 FNDC1Q4ZHG4 1894 aaPredicted RBP11.48□□□□□ -0.57
FAM49A-202ENST00000406434 LRRIQ4A6NIV6 560 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 E9PMD0 336 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 HOXA2O43364 376 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 EOMESO95936 686 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 LINC00271P0C7V0 271 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 SKIP12755 728 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 CYP11B2P19099 503 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 SYT1P21579 422 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 MUTP22033 750 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 PTENP60484 403 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 ATP2C1P98194 919 aaPredicted RBP11.47□□□□□ -0.57
FAM49A-202ENST00000406434 CAPSQ13938 189 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 EP400NLQ6ZTU2 488 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 HSCBQ8IWL3 235 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 KLHL23Q8NBE8 558 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 MCPH1Q8NEM0 835 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 LPPQ93052 612 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 MRPL38Q96DV4 380 aaKnown RBP11.47□□□□□ -0.57
FAM49A-202ENST00000406434 INTS4Q96HW7 963 aaKnown RBP11.47□□□□□ -0.57
FAM49A-202ENST00000406434 CPB2Q96IY4 423 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 CASD1Q96PB1 797 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 PLVAPQ9BX97 442 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 TMEM117Q9H0C3 514 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 BHMT2Q9H2M3 363 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 RNF19AQ9NV58 838 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 THEGQ9P2T0 379 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 PLAGL2Q9UPG8 496 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 PCDHB12Q9Y5F1 795 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 EYSQ5T1H1 3165 aa11.47□□□□□ -0.57
FAM49A-202ENST00000406434 COL4A4P53420 1690 aaPredicted RBP11.46□□□□□ -0.57
FAM49A-202ENST00000406434 C5orf67F2Z3F1 127 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 DLL1O00548 723 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 SSBP05455 408 aaKnown RBP eCLIP11.46□□□□□ -0.57
FAM49A-202ENST00000406434 HSP90AA1P07900 732 aaKnown RBP11.46□□□□□ -0.57
FAM49A-202ENST00000406434 LIG1P18858 919 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 TFF2Q03403 129 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 CLLU1OSQ5K130 101 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms