RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 DCLRE1BQ9H816 532 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 PRDM16Q9HAZ2 1276 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 PIH1D3Q9NQM4 214 aaKnown RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 METTL5Q9NRN9 209 aaKnown RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 DDX18Q9NVP1 670 aaKnown RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 TXNDC16Q9P2K2 825 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 ARMCX3Q9UH62 379 aaPredicted RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 GGA1Q9UJY5 639 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 SRPRBQ9Y5M8 271 aaKnown RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 SCN9AQ15858 1988 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 MYH1P12882 1939 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 EXOC1LA0A1B0GW35 172 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 GIPC1O14908 333 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 LSM1O15116 133 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 RAD51CO43502 376 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 MAN1A2O60476 641 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 E2F6O75461 281 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 VIL1P09327 827 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 CALM1P0DP23 149 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 CALM2P0DP24 149 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 CALM3P0DP25 149 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 STMN1P16949 149 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 TARSP26639 723 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 HIBADHP31937 336 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 HSPA9P38646 679 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 CYTH1Q15438 398 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 ARHGAP44Q17R89 818 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 STXBP4Q6ZWJ1 553 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 TSEN2Q8NCE0 465 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 ATP6V0A1Q93050 837 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 RBM41Q96IZ5 413 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 RIOK1Q9BRS2 568 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 TMBIM4Q9HC24 238 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 LRCH1Q9Y2L9 728 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 DUSP10Q9Y6W6 482 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 ORC4O43929 436 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 EPB41P11171 864 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 MLH1P40692 756 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 PTGER2P43116 358 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 ZAP70P43403 619 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 NOP14P78316 857 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 SCARF1Q14162 830 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 ITIH4Q14624 930 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 R3HDM1Q15032 1099 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 ANKRD20A4Q4UJ75 823 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 TTMPQ5BVD1 217 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 PALM2Q8IXS6 379 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 STAG2Q8N3U4 1231 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 DHTKD1Q96HY7 919 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 MPP4Q96JB8 637 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 TRIM56Q9BRZ2 755 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 NDST4Q9H3R1 872 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 PICK1Q9NRD5 415 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 LIMA1Q9UHB6 759 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 HAO1Q9UJM8 370 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 IQSEC3Q9UPP2 1182 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 GRID2IPA4D2P6 1211 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 CCDC22O60826 627 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 PRDM1O75626 825 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 STK10O94804 968 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 AGTP01019 485 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 PDE6AP16499 860 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 KCNQ4P56696 695 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 ERVK-24P63145 666 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 TRIP13Q15645 432 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 MAN2A1Q16706 1144 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 P3H1Q32P28 736 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 LGSNQ5TDP6 509 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 APOA5Q6Q788 366 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 PODNQ7Z5L7 613 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 CRACR2BQ8N4Y2 399 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 ATP2A3Q93084 1043 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 CCDC124Q96CT7 223 aaKnown RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 THAP9Q9H5L6 903 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 AGPAT5Q9NUQ2 364 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 SUCLA2Q9P2R7 463 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-203ENST00000406072 CAPN11Q9UMQ6 739 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 SYNPO2Q9UMS6 1093 aa6.27□□□□□ -1.41
HDAC9-203ENST00000406072 DPPA5A6NC42 116 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 IQCA1LA6NCM1 817 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 ZBBXA8MT70 800 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 HNRNPRO43390 633 aaKnown RBP6.26□□□□□ -1.41
HDAC9-203ENST00000406072 FESP07332 822 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 EEF1B2P24534 225 aaKnown RBP6.26□□□□□ -1.41
HDAC9-203ENST00000406072 KCNJ2P63252 427 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 EXOSC10Q01780 885 aaKnown RBP6.26□□□□□ -1.41
HDAC9-203ENST00000406072 CTDSPL2Q05D32 466 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 MKRN3Q13064 507 aaKnown RBP6.26□□□□□ -1.41
HDAC9-203ENST00000406072 PPP2R5CQ13362 524 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 MESDQ14696 234 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 SNX30Q5VWJ9 437 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 IRGCQ6NXR0 463 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 ALKBH5Q6P6C2 394 aaKnown RBP6.26□□□□□ -1.41
HDAC9-203ENST00000406072 SLF2Q8IX21 1173 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 MIGA1Q8NAN2 632 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 NSUN4Q96CB9 384 aaKnown RBP6.26□□□□□ -1.41
HDAC9-203ENST00000406072 TRIM11Q96F44 468 aa6.26□□□□□ -1.41
HDAC9-203ENST00000406072 STRBPQ96SI9 672 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms