RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SPECC1LQ69YQ0 1117 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ARMCX5Q6P1M9 558 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 CXCL17Q6UXB2 119 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 EXOC8Q8IYI6 725 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 GOLGA5Q8TBA6 731 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 TCP11Q8WWU5 503 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 NTPCRQ9BSD7 190 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 STRA6Q9BX79 667 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 CFHR5Q9BXR6 569 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 FAM49AQ9H0Q0 323 aaPredicted RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 MMRN2Q9H8L6 949 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 XPNPEP3Q9NQH7 507 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ARMCX3Q9UH62 379 aaPredicted RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 EXOC7Q9UPT5 735 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 TRIM17Q9Y577 477 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.06□□□□□ -1.76
RTN4-208ENST00000404909 UBE4BO95155 1302 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ZNF236Q9UL36 1845 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 LOXHD1Q8IVV2 1947 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 GOLGA8IPA6NC78 632 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 GOLGA8JA6NMD2 632 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 LGALS16A8MUM7 142 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ANKRD63C9JTQ0 380 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 INO80B-WBP1J3KQ70 363 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 GNA14O95837 355 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 IGHA2P01877 340 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 HMGCRP04035 888 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 SMIM10L2AP0DMW4 78 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 SMIM10L2BP0DMW5 78 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 HARSP12081 509 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 HOXD8P13378 290 aaPredicted RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 LIG4P49917 911 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 RTP1P59025 263 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 LRMPQ12912 555 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 IRF5Q13568 498 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MXD4Q14582 209 aaPredicted RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 MFSD10Q14728 455 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MAN2A1Q16706 1144 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 VWA3BQ502W6 1294 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MAP4K3Q8IVH8 894 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 FAM186BQ8IYM0 893 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 CCDC155Q8N6L0 562 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ZSWIM2Q8NEG5 633 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 LMBR1Q8WVP7 490 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 POMGNT1Q8WZA1 660 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 KAT2BQ92831 832 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 VTI1AQ96AJ9 217 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 SAAL1Q96ER3 474 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 INO80BQ9C086 356 aaPredicted RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 NDST4Q9H3R1 872 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ARHGAP28Q9P2N2 729 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ANKFY1Q9P2R3 1169 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 PPME1Q9Y570 386 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 IGKV6-21A0A0C4DH24 114 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 H0YCG3 227 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 RBAK-RBAKDNI3L0D1 243 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MAGEB2O15479 319 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 GAS2O43903 313 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 F2P00734 622 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 SFPQP23246 707 aaKnown RBP eCLIP4.06□□□□□ -1.762e-6■■■□□ 15.5
RTN4-208ENST00000404909 ADSSP30520 456 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 PSMC2P35998 433 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 PSEN2P49810 448 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 KLK7P49862 253 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ADKP55263 362 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 ZNF200P98182 395 aaPredicted RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 MAP2K1Q02750 393 aaPredicted RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 ARHGEF6Q15052 776 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 FAM47CQ5HY64 1035 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MIIPQ5JXC2 388 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 NFRKBQ6P4R8 1299 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MTHFD1LQ6UB35 978 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 TAS1R3Q7RTX0 852 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 PPFIBP1Q86W92 1011 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ZBTB8OSQ8IWT0 167 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 C7orf31Q8N865 590 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 NLRP7Q8WX94 980 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MAP7D2Q96T17 732 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 CRACR2AQ9BSW2 395 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 TCHPQ9BT92 498 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 TARS2Q9BW92 718 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 ST6GALNAC4Q9H4F1 302 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 HSPBP1Q9NZL4 362 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 KCNG1Q9UIX4 513 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 Q9Y3F1 56 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 KAT6AQ92794 2004 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 EVPLQ92817 2033 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 INHAP05111 366 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 HSPA6P17066 643 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 TRIM21P19474 475 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 PURAQ00577 322 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 TFDP1Q14186 410 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 SYCP1Q15431 976 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MARCH8Q5T0T0 291 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 FOXR2Q6PJQ5 311 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 XXYLT1Q8NBI6 393 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 SH3TC2Q8TF17 1288 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 CACTINQ8WUQ7 758 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.06□□□□□ -1.765e-9■■■□□ 14.6
RTN4-208ENST00000404909 MGAMO43451 1857 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms