RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 LAMTOR4Q0VGL1 99 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 GPM6BQ13491 265 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 ARL6IP4Q66PJ3 421 aaKnown RBP18.31■□□□□ 0.52
CGREF1-205ENST00000404694 POTEGQ6S5H5 508 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 ERMNQ8TAM6 284 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 SRGAP2CP0DJJ0 459 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 XRCC6P12956 609 aaKnown RBP eCLIP18.3■□□□□ 0.52
CGREF1-205ENST00000404694 ATP2C1P98194 919 aaPredicted RBP18.3■□□□□ 0.52
CGREF1-205ENST00000404694 FAM102BQ5T8I3 360 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 HAUS3Q68CZ6 603 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 CHST12Q9NRB3 414 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 THEGQ9P2T0 379 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 ASAP2O43150 1006 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 USO1O60763 962 aaKnown RBP18.3■□□□□ 0.52
CGREF1-205ENST00000404694 CUTAO60888 179 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 RB1P06400 928 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 FGFR1P11362 822 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 ECHDC2Q86YB7 292 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 IGSF22Q8N9C0 903 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 KRI1Q8N9T8 703 aaKnown RBP18.3■□□□□ 0.52
CGREF1-205ENST00000404694 RNF149Q8NC42 400 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 NACC1Q96RE7 527 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 C11orf84Q9BUA3 381 aaPredicted RBP18.3■□□□□ 0.52
CGREF1-205ENST00000404694 MINDY3Q9H8M7 445 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 DACT1Q9NYF0 836 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 LRWD1Q9UFC0 647 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 DBR1Q9UK59 544 aaKnown RBP18.3■□□□□ 0.52
CGREF1-205ENST00000404694 PCDHA7Q9UN72 937 aa18.3■□□□□ 0.52
CGREF1-205ENST00000404694 PIN4Q9Y237 131 aaKnown RBP18.3■□□□□ 0.52
CGREF1-205ENST00000404694 SRPRBQ9Y5M8 271 aaKnown RBP18.3■□□□□ 0.52
CGREF1-205ENST00000404694 A0A0U1RQF3 1178 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 TBKBP1A7MCY6 615 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
CGREF1-205ENST00000404694 MUTP22033 750 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 PRPHP41219 470 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 PDIA5Q14554 519 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 MXD4Q14582 209 aaPredicted RBP18.29■□□□□ 0.52
CGREF1-205ENST00000404694 SKIV2LQ15477 1246 aaKnown RBP18.29■□□□□ 0.52
CGREF1-205ENST00000404694 SRGAP1Q7Z6B7 1085 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
CGREF1-205ENST00000404694 MRPL38Q96DV4 380 aaKnown RBP18.29■□□□□ 0.52
CGREF1-205ENST00000404694 PLVAPQ9BX97 442 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 RAB34Q9BZG1 259 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 AGPAT5Q9NUQ2 364 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 RNF19AQ9NV58 838 aa18.29■□□□□ 0.52
CGREF1-205ENST00000404694 HOXA2O43364 376 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
CGREF1-205ENST00000404694 CMA1P23946 247 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 ARL2P36404 184 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 CCT6AP40227 531 aaKnown RBP18.28■□□□□ 0.52
CGREF1-205ENST00000404694 PHKA2P46019 1235 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 IL17AQ16552 155 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 ECM1Q16610 540 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 PTPROQ16827 1216 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 ZNF598Q86UK7 904 aaKnown RBP18.28■□□□□ 0.52
CGREF1-205ENST00000404694 ASAP3Q8TDY4 903 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 TRAIPQ9BWF2 469 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 HCSTQ9UBK5 93 aa18.28■□□□□ 0.52
CGREF1-205ENST00000404694 CAPSQ13938 189 aa18.27■□□□□ 0.51
CGREF1-205ENST00000404694 AXDND1Q5T1B0 1012 aaPredicted RBP18.27■□□□□ 0.51
CGREF1-205ENST00000404694 TWF2Q6IBS0 349 aaKnown RBP18.27■□□□□ 0.51
CGREF1-205ENST00000404694 DTHD1Q6ZMT9 781 aa18.27■□□□□ 0.51
CGREF1-205ENST00000404694 RNF169Q8NCN4 708 aa18.27■□□□□ 0.51
CGREF1-205ENST00000404694 GPT2Q8TD30 523 aa18.27■□□□□ 0.51
CGREF1-205ENST00000404694 SNX29Q8TEQ0 813 aa18.27■□□□□ 0.51
CGREF1-205ENST00000404694 P2RX5Q93086 422 aa18.27■□□□□ 0.51
CGREF1-205ENST00000404694 TMEM117Q9H0C3 514 aa18.27■□□□□ 0.51
CGREF1-205ENST00000404694 POLR3FQ9H1D9 316 aaPredicted RBP18.27■□□□□ 0.51
CGREF1-205ENST00000404694 PLXNA4Q9HCM2 1894 aa18.27■□□□□ 0.51
CGREF1-205ENST00000404694 PP2D1A8MPX8 630 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 GRM6O15303 877 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 EOMESO95936 686 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 GLRA2P23416 452 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 MARCKSP29966 332 aaPredicted RBP18.26■□□□□ 0.51
CGREF1-205ENST00000404694 PTENP60484 403 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 POU5F1BQ06416 359 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 TFDP1Q14186 410 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 TIGD5Q53EQ6 642 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 CLLU1OSQ5K130 101 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 MAEAQ7L5Y9 396 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 IFNLR1Q8IU57 520 aaPredicted RBP18.26■□□□□ 0.51
CGREF1-205ENST00000404694 ABI1Q8IZP0 508 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 MCPH1Q8NEM0 835 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 ATXN2LQ8WWM7 1075 aaKnown RBP18.26■□□□□ 0.51
CGREF1-205ENST00000404694 CASD1Q96PB1 797 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 LMAN2LQ9H0V9 348 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 GPRC5CQ9NQ84 441 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 TYW1Q9NV66 732 aaKnown RBP18.26■□□□□ 0.51
CGREF1-205ENST00000404694 FBXO2Q9UK22 296 aaPredicted RBP18.26■□□□□ 0.51
CGREF1-205ENST00000404694 STK24Q9Y6E0 443 aa18.26■□□□□ 0.51
CGREF1-205ENST00000404694 FAM237AA0A1B0GTK4 181 aa18.25■□□□□ 0.51
CGREF1-205ENST00000404694 ARHGEF35A5YM69 484 aa18.25■□□□□ 0.51
CGREF1-205ENST00000404694 HOXA11P31270 313 aaPredicted RBP18.25■□□□□ 0.51
CGREF1-205ENST00000404694 RAB27AP51159 221 aa18.25■□□□□ 0.51
CGREF1-205ENST00000404694 NAALADL2Q58DX5 795 aa18.25■□□□□ 0.51
CGREF1-205ENST00000404694 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
CGREF1-205ENST00000404694 PADI6Q6TGC4 694 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms