RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 MAP9Q49MG5 647 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 OTUD6AQ7L8S5 288 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 NLGN2Q8NFZ4 835 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 SPIRE2Q8WWL2 714 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 CBWD1Q9BRT8 395 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 NTPCRQ9BSD7 190 aaKnown RBP17.12■□□□□ 0.33
CDC42-203ENST00000400259 GPRC5CQ9NQ84 441 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 EXOC7Q9UPT5 735 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 SIP14410 1827 aa17.11■□□□□ 0.33
CDC42-203ENST00000400259 TISP43B9A030 160 aa17.11■□□□□ 0.33
CDC42-203ENST00000400259 POLR3GO15318 223 aaPredicted RBP17.11■□□□□ 0.33
CDC42-203ENST00000400259 SLC16A4O15374 487 aa17.11■□□□□ 0.33
CDC42-203ENST00000400259 CCDC181Q5TID7 509 aa17.11■□□□□ 0.33
CDC42-203ENST00000400259 ZNF771Q7L3S4 317 aaPredicted RBP17.11■□□□□ 0.33
CDC42-203ENST00000400259 TMEM161BQ8NDZ6 487 aa17.11■□□□□ 0.33
CDC42-203ENST00000400259 KIFAP3Q92845 792 aa17.11■□□□□ 0.33
CDC42-203ENST00000400259 ZNF862O60290 1169 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 PSAPP07602 524 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 LMNB1P20700 586 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 CXCR5P32302 372 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 SMTNP53814 917 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 CFAP221Q4G0U5 840 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 C1orf220Q5T0J3 134 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 FAM102BQ5T8I3 360 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 MAP4K3Q8IVH8 894 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 LRRC57Q8N9N7 239 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 SH2D3AQ9BRG2 576 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 EMSYQ7Z589 1322 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 SPATA31C2B4DYI2 1134 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 H2AFZP0C0S5 128 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 NPTX2P47972 431 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 RTP1P59025 263 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 DLG4P78352 724 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 CASP8Q14790 479 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 KIF22Q14807 665 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 EPC2Q52LR7 807 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 H2AFVQ71UI9 128 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 RDH13Q8NBN7 331 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 LNX1Q8TBB1 728 aaPredicted RBP17.1■□□□□ 0.33
CDC42-203ENST00000400259 PCIF1Q9H4Z3 704 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
CDC42-203ENST00000400259 PDLIM7Q9NR12 457 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 GABBR1Q9UBS5 961 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 TBX20Q9UMR3 447 aa17.1■□□□□ 0.33
CDC42-203ENST00000400259 FTCDO95954 541 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 PPP3CAQ08209 521 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 CETN1Q12798 172 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
CDC42-203ENST00000400259 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 PHLDB3Q6NSJ2 640 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 CHST13Q8NET6 341 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 VIPAS39Q9H9C1 493 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
CDC42-203ENST00000400259 SLC9A2Q9UBY0 812 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 LRRC37A2A6NM11 1700 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 USP2O75604 605 aaPredicted RBP17.09■□□□□ 0.33
CDC42-203ENST00000400259 EIF3JO75822 258 aaKnown RBP17.09■□□□□ 0.33
CDC42-203ENST00000400259 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 PSMB7Q99436 277 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 SNCAIPQ9Y6H5 919 aa17.09■□□□□ 0.33
CDC42-203ENST00000400259 NCANO14594 1321 aa17.08■□□□□ 0.33
CDC42-203ENST00000400259 OAS2P29728 719 aaKnown RBP17.08■□□□□ 0.33
CDC42-203ENST00000400259 ICAM3P32942 547 aa17.08■□□□□ 0.33
CDC42-203ENST00000400259 ABHD15Q6UXT9 468 aa17.08■□□□□ 0.33
CDC42-203ENST00000400259 CCNI2Q6ZMN8 369 aaPredicted RBP17.08■□□□□ 0.33
CDC42-203ENST00000400259 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.33
CDC42-203ENST00000400259 MCPH1Q8NEM0 835 aa17.08■□□□□ 0.33
CDC42-203ENST00000400259 TPCN2Q8NHX9 752 aa17.08■□□□□ 0.33
CDC42-203ENST00000400259 PLEKHO2Q8TD55 490 aa17.08■□□□□ 0.33
CDC42-203ENST00000400259 CEP170P1Q96L14 293 aa17.08■□□□□ 0.33
CDC42-203ENST00000400259 IGSF9BQ9UPX0 1349 aa17.08■□□□□ 0.32
CDC42-203ENST00000400259 DGAT1O75907 488 aa17.08■□□□□ 0.32
CDC42-203ENST00000400259 ACTR2P61160 394 aa17.08■□□□□ 0.32
CDC42-203ENST00000400259 ENPEPQ07075 957 aa17.08■□□□□ 0.32
CDC42-203ENST00000400259 GLE1Q53GS7 698 aaKnown RBP17.08■□□□□ 0.32
CDC42-203ENST00000400259 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.08■□□□□ 0.32
CDC42-203ENST00000400259 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.32
CDC42-203ENST00000400259 KMT5AQ9NQR1 393 aa17.08■□□□□ 0.32
CDC42-203ENST00000400259 H3BQF6 201 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 ADRB2P07550 413 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 ADSSP30520 456 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 GPS2Q13227 327 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 LMBR1Q8WVP7 490 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 BSNDQ8WZ55 320 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 KCNN1Q92952 543 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 FBXL18Q96ME1 805 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 LRRC1Q9BTT6 524 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 EHD2Q9NZN4 543 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 PFASO15067 1338 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 CCDC169A6NNP5 214 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 ANKRD63C9JTQ0 380 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 KIF4AO95239 1232 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 TNFRSF8P28908 595 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 ABCD1P33897 745 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 GYS2P54840 703 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 VGLL4Q14135 290 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 TAF3Q5VWG9 929 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 SWSAP1Q6NVH7 229 aa17.07■□□□□ 0.32
CDC42-203ENST00000400259 MIS18BP1Q6P0N0 1132 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms