RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TFDP1Q14186 410 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 HAUS3Q68CZ6 603 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 POF1BQ8WVV4 589 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 PPP2R3CQ969Q6 453 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 NACC1Q96RE7 527 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 MINDY3Q9H8M7 445 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 FAM105AQ9NUU6 356 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 HCSTQ9UBK5 93 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 TNFRSF10AO00220 468 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 LAD1O00515 517 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 FGF18O76093 207 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 KCNA5P22460 613 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 GJB2P29033 226 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 PPM1AP35813 382 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 HYAL1Q12794 435 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 CTC1Q2NKJ3 1217 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 RNF169Q8NCN4 708 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 MCPH1Q8NEM0 835 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 HELQQ8TDG4 1101 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 NFKBIZQ9BYH8 718 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 LZTS1Q9Y250 596 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 STK24Q9Y6E0 443 aa16.54■□□□□ 0.24
SMIM11A-203ENST00000399299 CARNS1A5YM72 827 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 USO1O60763 962 aaKnown RBP16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 AXLP30530 894 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 PTGDRQ13258 359 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 CAPSQ13938 189 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 PDIA5Q14554 519 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 NBR1Q14596 966 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 PUS10Q3MIT2 529 aaKnown RBP16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 PDE12Q6L8Q7 609 aaKnown RBP16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 POTEGQ6S5H5 508 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 KCNT2Q6UVM3 1135 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 THNSL1Q8IYQ7 743 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 IGSF22Q8N9C0 903 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 ASAP3Q8TDY4 903 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 RAB34Q9BZG1 259 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 TLR9Q9NR96 1032 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 PCDHB6Q9Y5E3 794 aa16.53■□□□□ 0.24
SMIM11A-203ENST00000399299 ERLIN2O94905 339 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 GLRA2P23416 452 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 IRS1P35568 1242 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 PRPHP41219 470 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 RILPL1Q5EBL4 403 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 GLB1LQ6UWU2 654 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 MRPL10Q7Z7H8 261 aaKnown RBP16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 PGBD4Q96DM1 585 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 CCDC51Q96ER9 411 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 POLR3FQ9H1D9 316 aaPredicted RBP16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 CLDND1Q9NY35 253 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 LRWD1Q9UFC0 647 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 PCDHB2Q9Y5E7 798 aa16.52■□□□□ 0.24
SMIM11A-203ENST00000399299 CNTNAP2Q9UHC6 1331 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 FSD2A1L4K1 749 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 H3BQV1 296 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 TSPAN1O60635 241 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 LTBRP36941 435 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 MBTD1Q05BQ5 628 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 NCBP1Q09161 790 aaKnown RBP16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 UBXN11Q5T124 520 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 MCTP1Q6DN14 999 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 NOTUMQ6P988 496 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 CNNM3Q8NE01 707 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 MRPS27Q92552 414 aaKnown RBP16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 LPPQ93052 612 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 SPG21Q9NZD8 308 aa16.51■□□□□ 0.23
SMIM11A-203ENST00000399299 A0A087WWV3 80 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 GRXCR2A6NFK2 248 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 INO80B-WBP1J3KQ70 363 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 FSCN2O14926 492 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 CCT6AP40227 531 aaKnown RBP16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 ADAM15Q13444 863 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 AMHR2Q16671 573 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 NOMO2Q5JPE7 1267 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 PTCRAQ6ISU1 281 aaPredicted RBP16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 AGMOQ6ZNB7 445 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 ADGRD2Q7Z7M1 963 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 SLC39A11Q8N1S5 342 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 EFHBQ8N7U6 833 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 NECAB3Q96P71 396 aaPredicted RBP16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 PUF60Q9UHX1 559 aaKnown RBP16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 FAM50BQ9Y247 325 aa16.5■□□□□ 0.23
SMIM11A-203ENST00000399299 ARHGEF35A5YM69 484 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 MEIS3P2A8K0S8 358 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 OFD1O75665 1012 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 CSPG5O95196 566 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 CYP11B2P19099 503 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 NCLP19338 710 aaKnown RBP16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 ALDH7A1P49419 539 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms