RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HSPBP1Q9NZL4 362 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CD2APQ9Y5K6 639 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 FOXN3O00409 490 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 SETSIPP0DME0 302 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 MAPK4P31152 587 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CETN2P41208 172 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 KCNJ1P48048 391 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 PPP2R2AP63151 447 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 OTUD6AQ7L8S5 288 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 LCA5Q86VQ0 697 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 SLC30A5Q8TAD4 765 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 NEK9Q8TD19 979 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 SPOCK2Q92563 424 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CNKSR1Q969H4 720 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 XPO6Q96QU8 1125 aaKnown RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 NAP1L3Q99457 506 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 MLXIPLQ9NP71 852 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 BAIAP2L1Q9UHR4 511 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 DBR1Q9UK59 544 aaKnown RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 SNHG28P0DPA3 235 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 GDAP1Q8TB36 358 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CAVIN3Q969G5 261 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 RNF25Q96BH1 459 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 PWWP2AQ96N64 755 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 MXRA8Q9BRK3 442 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 C11orf70Q9BRQ4 267 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 KIFC3Q9BVG8 833 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 TUFT1Q9NNX1 390 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 BCL9LQ86UU0 1499 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 LIG4P49917 911 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 SLC12A3P55017 1021 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 MAP3K7CLP57077 242 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 STRN3Q13033 797 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CBWD6Q4V339 395 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CBWD3Q5JTY5 395 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 KIAA1755Q5JYT7 1200 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CBWD5Q5RIA9 395 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 KAZNQ674X7 775 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 TBC1D1Q86TI0 1168 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 RBM46Q8TBY0 533 aaKnown RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF564Q8TBZ8 553 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-202ENST00000398417 SEPT8Q92599 483 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 CCDC77Q9BR77 488 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 HAUS2Q9NVX0 235 aa5.31□□□□□ -1.56
SMAD4-202ENST00000398417 EVI5O60447 810 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CTNNA2P26232 953 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 HOXA7P31268 230 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CA8P35219 290 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 RWDD2BP57060 319 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 MCF2L2Q86YR7 1114 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CDAN1Q8IWY9 1227 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 KIFAP3Q92845 792 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF341Q9BYN7 854 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ACP6Q9NPH0 428 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 AGPAT3Q9NRZ7 376 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ALG6Q9Y672 507 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ZHX2Q9Y6X8 837 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PI4K2BG5E9Z4 385 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 THAP12O43422 761 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 LIN9Q5TKA1 542 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 SWSAP1Q6NVH7 229 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 HOOK3Q86VS8 718 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CBWD2Q8IUF1 395 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 SLITRK6Q9H5Y7 841 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 VCPKMTQ9H867 229 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 KLHL11Q9NVR0 708 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PPP1R9AQ9ULJ8 1098 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 TRIM17Q9Y577 477 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 FAM187AA6NFU0 413 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ATF2P15336 505 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 SMTNP53814 917 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 BFSP1Q12934 665 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 SEZ6Q53EL9 994 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 C10orf76Q5T2E6 689 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 IRF2BP2Q7Z5L9 587 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 LRRC34Q8IZ02 419 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 DEPTORQ8TB45 409 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 HAUS1Q96CS2 278 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PCDHB18PQ96TA0 734 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 INTS9Q9NV88 658 aaKnown RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 APEX2Q9UBZ4 518 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ROBO3Q96MS0 1386 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 DENND3A2RUS2 1198 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ZBBXA8MT70 800 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CHN1P15882 459 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 HSPA1LP34931 641 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 SREBF1P36956 1147 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ASTE1Q2TB18 679 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PRAMEF18Q5VWM3 479 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CPNE8Q86YQ8 564 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PPP1R16BQ96T49 567 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CBWD1Q9BRT8 395 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 RAB20Q9NX57 234 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ANAPC5Q9UJX4 755 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 FEM1BQ9UK73 627 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 RASGRF2O14827 1237 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PSMD10O75832 226 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 RASA3Q14644 834 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 UAP1Q16222 522 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 SGO2Q562F6 1265 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms