RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 CD79BP40259 229 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 ADAM17P78536 824 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 RFT1Q96AA3 541 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 SNF8Q96H20 258 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 NUDCD1Q96RS6 583 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 NOD2Q9HC29 1040 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCBE1-201ENST00000398179 SOX13Q9UN79 622 aa13.6□□□□□ -0.23
CCBE1-201ENST00000398179 DNM1LO00429 736 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 RGS16O15492 202 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 TARSP26639 723 aaKnown RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 RAB27AP51159 221 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 S100A12P80511 92 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 GSTA5Q7RTV2 222 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 SNX21Q969T3 373 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 NMD3Q96D46 503 aaKnown RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 MYLK2Q9H1R3 596 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 HPCAL4Q9UM19 191 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 CLCA4Q14CN2 919 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 ZNF589Q86UQ0 364 aaPredicted RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 FCHSD1Q86WN1 690 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 SERPINI1Q99574 410 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 SLF1Q9BQI6 1058 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 NOL6Q9H6R4 1146 aaKnown RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 PCDH18Q9HCL0 1135 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 SEC31AO94979 1220 aaKnown RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 SCNN1BP51168 640 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 THOP1P52888 689 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 EPS8Q12929 822 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 USP4Q13107 963 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 AARS2Q5JTZ9 985 aaKnown RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 PARP2Q9UGN5 583 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 VHLP40337 213 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 RGS2P41220 211 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 ERICH1Q86X53 443 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 GOLM1Q8NBJ4 401 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 HPS4Q9NQG7 708 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 EHD3Q9NZN3 535 aa13.59□□□□□ -0.23
CCBE1-201ENST00000398179 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
CCBE1-201ENST00000398179 CFAP99D6REC4 459 aa13.58□□□□□ -0.23
CCBE1-201ENST00000398179 CRCPO75575 148 aa13.58□□□□□ -0.23
CCBE1-201ENST00000398179 VCLP18206 1134 aa13.58□□□□□ -0.23
CCBE1-201ENST00000398179 THOC5Q13769 683 aaKnown RBP13.58□□□□□ -0.23
CCBE1-201ENST00000398179 LONP2Q86WA8 852 aa13.58□□□□□ -0.23
CCBE1-201ENST00000398179 MCUBQ9NWR8 336 aa13.58□□□□□ -0.23
CCBE1-201ENST00000398179 AFF4Q9UHB7 1163 aaKnown RBP13.58□□□□□ -0.23
CCBE1-201ENST00000398179 ZNF225Q9UK10 706 aa13.58□□□□□ -0.23
CCBE1-201ENST00000398179 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 SNPHO15079 494 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 RPN1P04843 607 aaKnown RBP13.58□□□□□ -0.24
CCBE1-201ENST00000398179 PDAP1Q13442 181 aaKnown RBP13.58□□□□□ -0.24
CCBE1-201ENST00000398179 KDELC1Q6UW63 502 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 TRIM36Q9NQ86 728 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 THEMIS2Q5TEJ8 643 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 TMEM53Q6P2H8 277 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 GATAD2BQ8WXI9 593 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 ZC3H10Q96K80 434 aaKnown RBP13.58□□□□□ -0.24
CCBE1-201ENST00000398179 RAB17Q9H0T7 212 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 GJC1P36383 396 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 ATG16L1Q676U5 607 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 TCEAL6Q6IPX3 200 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.58□□□□□ -0.24
CCBE1-201ENST00000398179 SPIRE2Q8WWL2 714 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 ASB12Q8WXK4 309 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 PHB2Q99623 299 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 SEZ6LQ9BYH1 1024 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 FBRSL1Q9HCM7 1045 aaKnown RBP13.58□□□□□ -0.24
CCBE1-201ENST00000398179 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 IKBKBO14920 756 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 MBD4O95243 580 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 EIF2S3P41091 472 aaKnown RBP13.58□□□□□ -0.24
CCBE1-201ENST00000398179 RGS19P49795 217 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 ZNF45Q02386 682 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 ZNF662Q6ZS27 426 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 TAGAPQ8N103 731 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 ZGPATQ8N5A5 531 aaKnown RBP13.58□□□□□ -0.24
CCBE1-201ENST00000398179 EMILIN2Q9BXX0 1053 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 GMIPQ9P107 970 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 LRCH1Q9Y2L9 728 aa13.58□□□□□ -0.24
CCBE1-201ENST00000398179 MAPK13O15264 365 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 C21orf2O43822 256 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 TRIM13O60858 407 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 MAPK3P27361 379 aaPredicted RBP13.57□□□□□ -0.24
CCBE1-201ENST00000398179 SNX17Q15036 470 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 PLA2G4EQ3MJ16 856 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 SIRT1Q96EB6 747 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 CHID1Q9BWS9 393 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 VPS11Q9H270 941 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 TIMMDC1Q9NPL8 285 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 GAS2O43903 313 aaKnown RBP13.57□□□□□ -0.24
CCBE1-201ENST00000398179 ALDH1L1O75891 902 aa13.57□□□□□ -0.24
CCBE1-201ENST00000398179 ITGB3P05106 788 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms