RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ECHDC2Q86YB7 292 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 SCUBE3Q8IX30 993 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 RSPH1Q8WYR4 309 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 CASP10Q92851 521 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 ASIC4Q96FT7 647 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 TCF25Q9BQ70 676 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 ENTPD7Q9NQZ7 604 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 GABBR1Q9UBS5 961 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 NR2E1Q9Y466 385 aa9.9□□□□□ -0.82
CAPN3-208ENST00000397204 KLF18A0A0U1RQI7 1052 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 CARNS1A5YM72 827 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 WDR64B1ANS9 1081 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 TRIM66O15016 1216 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 CDC27P30260 824 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 ALDH7A1P49419 539 aaKnown RBP9.89□□□□□ -0.83
CAPN3-208ENST00000397204 TCF15Q12870 199 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 PLPP4Q5VZY2 271 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 CES5AQ6NT32 575 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 TRMT1LQ7Z2T5 733 aaKnown RBP9.89□□□□□ -0.83
CAPN3-208ENST00000397204 UBALD2Q8IYN6 164 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 REXO1Q8N1G1 1221 aaKnown RBP9.89□□□□□ -0.83
CAPN3-208ENST00000397204 LRRC43Q8N309 656 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 LINC01465Q8N7H1 131 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 BICD2Q8TD16 824 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 RIPOR3Q96MK2 946 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 NECTIN4Q96NY8 510 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 PPP1R16BQ96T49 567 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 RIT2Q99578 217 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 ADAM7Q9H2U9 754 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 CHST12Q9NRB3 414 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 DISC1Q9NRI5 854 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 RNF19AQ9NV58 838 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 DACT1Q9NYF0 836 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 AKT3Q9Y243 479 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 SAMM50Q9Y512 469 aa9.89□□□□□ -0.83
CAPN3-208ENST00000397204 PRPF3O43395 683 aaKnown RBP9.88□□□□□ -0.83
CAPN3-208ENST00000397204 CXCL14O95715 111 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 DARSP14868 501 aaKnown RBP9.88□□□□□ -0.83
CAPN3-208ENST00000397204 MTHFRP42898 656 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 GPC3P51654 580 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 USP11P51784 963 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 CLCN3P51790 818 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 FGD1P98174 961 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 SMC1AQ14683 1233 aaKnown RBP9.88□□□□□ -0.83
CAPN3-208ENST00000397204 PRR16Q569H4 304 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 BMP2KLQ5H9B9 411 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 LLGL2Q6P1M3 1020 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 ZNF598Q86UK7 904 aaKnown RBP9.88□□□□□ -0.83
CAPN3-208ENST00000397204 KREMEN2Q8NCW0 462 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 TCEANC2Q96MN5 208 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 TRAIPQ9BWF2 469 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 MRPL9Q9BYD2 267 aaKnown RBP9.88□□□□□ -0.83
CAPN3-208ENST00000397204 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.88□□□□□ -0.83
CAPN3-208ENST00000397204 VPS13AQ96RL7 3174 aa9.88□□□□□ -0.83
CAPN3-208ENST00000397204 FAM186AA6NE01 2351 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 C2orf71A6NGG8 1288 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 ZNF862O60290 1169 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 SFNP31947 248 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 DNM2P50570 870 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 METAP2P50579 478 aaKnown RBP eCLIP9.87□□□□□ -0.83
CAPN3-208ENST00000397204 VCPP55072 806 aaKnown RBP9.87□□□□□ -0.83
CAPN3-208ENST00000397204 AKAP17AQ02040 695 aaKnown RBP9.87□□□□□ -0.83
CAPN3-208ENST00000397204 GIT2Q14161 759 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 TARBP2Q15633 366 aaKnown RBP9.87□□□□□ -0.83
CAPN3-208ENST00000397204 ADCK5Q3MIX3 580 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 CLLU1OSQ5K130 101 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 ATAT1Q5SQI0 421 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 SLC39A11Q8N1S5 342 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 FBXL16Q8N461 479 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 LRRC71Q8N4P6 559 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 RNF169Q8NCN4 708 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 ATOH1Q92858 354 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-208ENST00000397204 LENG9Q96B70 501 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 APOL5Q9BWW9 433 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 GCOM2Q9BZD3 368 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-208ENST00000397204 NAP1L2Q9ULW6 460 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-208ENST00000397204 SORCS3Q9UPU3 1222 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 SLC27A5Q9Y2P5 690 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 HCFC2Q9Y5Z7 792 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 IRAK3Q9Y616 596 aa9.87□□□□□ -0.83
CAPN3-208ENST00000397204 PROB1E7EW31 1015 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 ADAMTS3O15072 1205 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 MSH4O15457 936 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 GAS7O60861 476 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 CLASP2O75122 1294 aaKnown RBP9.86□□□□□ -0.83
CAPN3-208ENST00000397204 ZNF623O75123 536 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 ADH1BP00325 375 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 SKIP12755 728 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 PBX3P40426 434 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 JAK3P52333 1124 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 POLGP54098 1239 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-208ENST00000397204 BCAR1P56945 870 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 TBC1D8BQ0IIM8 1120 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 XKR3Q5GH77 459 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 ZDHHC14Q8IZN3 488 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 TMEM87AQ8NBN3 555 aa9.86□□□□□ -0.83
CAPN3-208ENST00000397204 RDM1Q8NG50 284 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms