RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ARHGAP6O43182 974 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 GNAT1P11488 350 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 DRP2Q13474 957 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 HIC1Q14526 733 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 ODR4Q5SWX8 454 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 EFCAB12Q6NXP0 572 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 REXO1L1PQ8IX06 675 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 PKNOX2Q96KN3 472 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 GLT1D1Q96MS3 346 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 SLC39A2Q9NP94 309 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 GRIN2DO15399 1336 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 A0A1W2PQ45 241 aaPredicted RBP16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 A0A1W2PQY0 241 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 PPP1R3GB7ZBB8 358 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 SGPL1O95470 568 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 DMP1Q13316 513 aaPredicted RBP16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 FAM178BQ8IXR5 827 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 SMYD4Q8IYR2 804 aaPredicted RBP16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 LRRC71Q8N4P6 559 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 SLC17A8Q8NDX2 589 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 U2AF1L4Q8WU68 220 aaKnown RBP16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 SPIRE2Q8WWL2 714 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 BSNDQ8WZ55 320 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 NTPCRQ9BSD7 190 aaKnown RBP16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 KCNG1Q9UIX4 513 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 V9GYY5 206 aaPredicted RBP16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 ZSCAN12O43309 604 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 GLRA2P23416 452 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 PPP1R2P41236 205 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 NCKAP1LP55160 1127 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 PEX3P56589 373 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 PTPN11Q06124 597 aaPredicted RBP16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 PPP2R5AQ15172 486 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 FBXO38Q6PIJ6 1188 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 KCNN1Q92952 543 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 ZBTB10Q96DT7 871 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 ST6GALNAC4Q9H4F1 302 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 MRPL44Q9H9J2 332 aaKnown RBP16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 NFE2L3Q9Y4A8 694 aa16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.29■□□□□ 0.2
TM9SF1-202ENST00000396854 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 TMOD1P28289 359 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 PRCPP42785 496 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 NAMPTP43490 491 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 DNM2P50570 870 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 CLCN3P51790 818 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 ITGA7Q13683 1181 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 MXD4Q14582 209 aaPredicted RBP16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 EPM2AIP1Q7L775 607 aaPredicted RBP16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 ZNF720Q7Z2F6 126 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 METTL13Q8N6R0 699 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 ASAP3Q8TDY4 903 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 IFT74Q96LB3 600 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 MCOLN1Q9GZU1 580 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 TBC1D7Q9P0N9 293 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 UBE4BO95155 1302 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 EIF3DO15371 548 aaKnown RBP eCLIP16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 PPP1R37O75864 691 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 CAPN2P17655 700 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 NPTX2P47972 431 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 GJA8P48165 433 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 SPECC1LQ69YQ0 1117 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 ADSSL1Q8N142 457 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 GUF1Q8N442 669 aaKnown RBP16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 SLC43A3Q8NBI5 491 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 GLIS3Q8NEA6 775 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 PRPF31Q8WWY3 499 aaKnown RBP16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 MED15Q96RN5 788 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 STRA6Q9BX79 667 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 FAM53CQ9NYF3 392 aa16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 SUCLA2Q9P2R7 463 aaPredicted RBP16.28■□□□□ 0.2
TM9SF1-202ENST00000396854 ASAP2O43150 1006 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 TREHO43280 583 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 STX10O60499 249 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 NMT1P30419 496 aaKnown RBP16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 CASP5P51878 434 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 SMTNP53814 917 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 ALCAMQ13740 583 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 BMT2Q1RMZ1 405 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 GDF6Q6KF10 455 aaPredicted RBP16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 STARD7Q9NQZ5 370 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 DNAI1Q9UI46 699 aa16.27■□□□□ 0.2
TM9SF1-202ENST00000396854 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 GOLGA6L9A6NEM1 432 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 K7ENM7 598 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 GCNT3O95395 438 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 CYP2C9P11712 490 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 H2AFXP16104 143 aaPredicted RBP16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 SCP2P22307 547 aa16.26■□□□□ 0.19
TM9SF1-202ENST00000396854 LAMTOR4Q0VGL1 99 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms