RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 INF2Q27J81 1249 aa14.9□□□□□ -0.02
RPA3-202ENST00000396682 C12orf76Q8N812 135 aaPredicted RBP14.9□□□□□ -0.02
RPA3-202ENST00000396682 ZNF579Q8NAF0 562 aaKnown RBP14.9□□□□□ -0.02
RPA3-202ENST00000396682 ZNF274Q96GC6 653 aaPredicted RBP14.9□□□□□ -0.02
RPA3-202ENST00000396682 IGSF21Q96ID5 467 aa14.9□□□□□ -0.02
RPA3-202ENST00000396682 NLRP4Q96MN2 994 aa14.9□□□□□ -0.02
RPA3-202ENST00000396682 SMOC2Q9H3U7 446 aa14.9□□□□□ -0.02
RPA3-202ENST00000396682 WRAP73Q9P2S5 460 aaPredicted RBP14.9□□□□□ -0.02
RPA3-202ENST00000396682 DNAJB4Q9UDY4 337 aa14.9□□□□□ -0.02
RPA3-202ENST00000396682 DDX25Q9UHL0 483 aaKnown RBP14.9□□□□□ -0.02
RPA3-202ENST00000396682 NR2E1Q9Y466 385 aa14.9□□□□□ -0.02
RPA3-202ENST00000396682 IRAK3Q9Y616 596 aa14.9□□□□□ -0.02
RPA3-202ENST00000396682 ZNF623O75123 536 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 OFD1O75665 1012 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 BRD1O95696 1058 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 GALTP07902 379 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 CTSAP10619 480 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 EPCAMP16422 314 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 AVPR2P30518 371 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 CA8P35219 290 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 AFF1P51825 1210 aaKnown RBP14.89□□□□□ -0.03
RPA3-202ENST00000396682 NPEPPSP55786 919 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 STK3Q13188 491 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 PPP2R5CQ13362 524 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 NONOQ15233 471 aaKnown RBP eCLIP14.89□□□□□ -0.03
RPA3-202ENST00000396682 NOMO2Q5JPE7 1267 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 RARS2Q5T160 578 aaKnown RBP14.89□□□□□ -0.03
RPA3-202ENST00000396682 CES5AQ6NT32 575 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 GLB1LQ6UWU2 654 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 DDX53Q86TM3 631 aaKnown RBP14.89□□□□□ -0.03
RPA3-202ENST00000396682 KREMEN2Q8NCW0 462 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 SLC22A17Q8WUG5 538 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 RSPH1Q8WYR4 309 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 RIPOR3Q96MK2 946 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 NECTIN4Q96NY8 510 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 PRRX2Q99811 253 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 KCNMB3Q9NPA1 279 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 CYP26B1Q9NR63 512 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 AGPAT5Q9NUQ2 364 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 KCNJ14Q9UNX9 436 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 INPP5FQ9Y2H2 1132 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 DMDP11532 3685 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 DENND4AQ7Z401 1863 aa14.89□□□□□ -0.03
RPA3-202ENST00000396682 ZFHX2Q9C0A1 2572 aaPredicted RBP14.88□□□□□ -0.03
RPA3-202ENST00000396682 CFAP54Q96N23 3096 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 CPLX1O14810 134 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 SKIP12755 728 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 SLC11A1P49279 550 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 POLGP54098 1239 aaPredicted RBP14.88□□□□□ -0.03
RPA3-202ENST00000396682 LETM2Q2VYF4 491 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 GALNT17Q6IS24 598 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 AGMOQ6ZNB7 445 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 ZBTB33Q86T24 672 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 ZNF280BQ86YH2 543 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 INO80BQ9C086 356 aaPredicted RBP14.88□□□□□ -0.03
RPA3-202ENST00000396682 MINDY3Q9H8M7 445 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 GJB4Q9NTQ9 266 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 FAM86C1Q9NVL1 165 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 SORCS3Q9UPU3 1222 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 PCDHB2Q9Y5E7 798 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 COL4A3BPQ9Y5P4 624 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
RPA3-202ENST00000396682 EPB41L2O43491 1005 aaKnown RBP14.87□□□□□ -0.03
RPA3-202ENST00000396682 DTNBO60941 627 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 ASGR2P07307 311 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 HOXA11P31270 313 aaPredicted RBP14.87□□□□□ -0.03
RPA3-202ENST00000396682 MTHFRP42898 656 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 QARSP47897 775 aaKnown RBP14.87□□□□□ -0.03
RPA3-202ENST00000396682 RAB27AP51159 221 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 MTMR3Q13615 1198 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 PTPN14Q15678 1187 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 UBXN11Q5T124 520 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 KIAA1841Q6NSI8 718 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 FAM177A1Q8N128 213 aaPredicted RBP14.87□□□□□ -0.03
RPA3-202ENST00000396682 PRPF31Q8WWY3 499 aaKnown RBP14.87□□□□□ -0.03
RPA3-202ENST00000396682 HAS1Q92839 578 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 PHF20Q9BVI0 1012 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 TM6SF1Q9BZW5 370 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 GBP3Q9H0R5 595 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 DHX33Q9H6R0 707 aaKnown RBP14.87□□□□□ -0.03
RPA3-202ENST00000396682 DZANK1Q9NVP4 752 aa14.87□□□□□ -0.03
RPA3-202ENST00000396682 DDHD2O94830 711 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 RNASELQ05823 741 aaKnown RBP14.86□□□□□ -0.03
RPA3-202ENST00000396682 SCRN1Q12765 414 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 GIT2Q14161 759 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 BMS1Q14692 1282 aaKnown RBP14.86□□□□□ -0.03
RPA3-202ENST00000396682 PPP4R3AQ6IN85 833 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 MRPL10Q7Z7H8 261 aaKnown RBP14.86□□□□□ -0.03
RPA3-202ENST00000396682 UBALD2Q8IYN6 164 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 OXER1Q8TDS5 423 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 TMEM143Q96AN5 459 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 CEP170P1Q96L14 293 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 FAM20AQ96MK3 541 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 JPH2Q9BR39 696 aaPredicted RBP14.86□□□□□ -0.03
RPA3-202ENST00000396682 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
RPA3-202ENST00000396682 ARID2Q68CP9 1835 aa14.86□□□□□ -0.03
RPA3-202ENST00000396682 PLXNA3P51805 1871 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 CARNS1A5YM72 827 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms