RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CACNB2Q08289 660 aaPredicted RBP6.86□□□□□ -1.31
AP3S1-202ENST00000395548 PUM1Q14671 1186 aaKnown RBP eCLIP6.86□□□□□ -1.31
AP3S1-202ENST00000395548 FAM110CQ1W6H9 321 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 ZNF385BQ569K4 471 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 RTP2Q5QGT7 225 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 CCDC81Q6ZN84 652 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 ASCL5Q7RTU5 278 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 NT5DC4Q86YG4 428 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 ARRDC4Q8NCT1 418 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 NUP43Q8NFH3 380 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 LPAR1Q92633 364 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 BRF1Q92994 677 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 PRMT6Q96LA8 375 aaPredicted RBP6.86□□□□□ -1.31
AP3S1-202ENST00000395548 TEPSINQ96N21 525 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 SGPP1Q9BX95 441 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 SLC12A9Q9BXP2 914 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 MTIF3Q9H2K0 278 aaKnown RBP6.86□□□□□ -1.31
AP3S1-202ENST00000395548 NKX2-4Q9H2Z4 354 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 GCM1Q9NP62 436 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 GJD2Q9UKL4 321 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 ACSL6Q9UKU0 697 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 JAG2Q9Y219 1238 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 FAM208BQ5VWN6 2430 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 FAM186AA6NE01 2351 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 DMXL1Q9Y485 3027 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 KBTBD13C9JR72 458 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 H0Y8X5 98 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 RFXAPO00287 272 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 POU4F1Q01851 419 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 MOGSQ13724 837 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 TRIM60Q495X7 471 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 CYP2R1Q6VVX0 501 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 ZNF662Q6ZS27 426 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 JAMLQ86YT9 394 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 FIBCD1Q8N539 461 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 ANKRD13CQ8N6S4 541 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 C19orf47Q8N9M1 422 aaKnown RBP6.85□□□□□ -1.31
AP3S1-202ENST00000395548 TMEM52Q8NDY8 209 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 SOCS4Q8WXH5 440 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 ANKS1AQ92625 1134 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 SRRTQ9BXP5 876 aaKnown RBP6.85□□□□□ -1.31
AP3S1-202ENST00000395548 PHAXQ9H814 394 aaKnown RBP6.85□□□□□ -1.31
AP3S1-202ENST00000395548 DIS3Q9Y2L1 958 aaKnown RBP6.85□□□□□ -1.31
AP3S1-202ENST00000395548 ZNF451Q9Y4E5 1061 aa6.85□□□□□ -1.31
AP3S1-202ENST00000395548 FLNBO75369 2602 aaKnown RBP6.84□□□□□ -1.31
AP3S1-202ENST00000395548 GRXCR1A8MXD5 290 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 KIAA0355O15063 1070 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 CLTBP09497 229 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 SLC5A1P13866 664 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 CYP2B6P20813 491 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 VIPR1P32241 457 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 GIPRP48546 466 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 HDLBPQ00341 1268 aaKnown RBP6.84□□□□□ -1.31
AP3S1-202ENST00000395548 PPIGQ13427 754 aaKnown RBP eCLIP6.84□□□□□ -1.31
AP3S1-202ENST00000395548 GNPTABQ3T906 1256 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 DNAJC2Q99543 621 aaKnown RBP6.84□□□□□ -1.31
AP3S1-202ENST00000395548 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.84□□□□□ -1.31
AP3S1-202ENST00000395548 TMEM39BQ9GZU3 492 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 ZNF70Q9UC06 446 aaPredicted RBP6.84□□□□□ -1.31
AP3S1-202ENST00000395548 MBD1Q9UIS9 605 aaPredicted RBP6.84□□□□□ -1.31
AP3S1-202ENST00000395548 FAM50BQ9Y247 325 aa6.84□□□□□ -1.31
AP3S1-202ENST00000395548 SIPA1L3O60292 1781 aaPredicted RBP6.84□□□□□ -1.31
AP3S1-202ENST00000395548 ZNF521Q96K83 1311 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 VPS13AQ96RL7 3174 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 SDHBP21912 280 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 CCND3P30281 292 aaPredicted RBP6.83□□□□□ -1.32
AP3S1-202ENST00000395548 GCLCP48506 637 aaPredicted RBP6.83□□□□□ -1.32
AP3S1-202ENST00000395548 TLE2Q04725 743 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 RAB3GAP1Q15042 981 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 LEXMQ3ZCV2 418 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 MCTP2Q6DN12 878 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 PSRC1Q6PGN9 363 aaPredicted RBP6.83□□□□□ -1.32
AP3S1-202ENST00000395548 TMEM151BQ8IW70 566 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 ADSSL1Q8N142 457 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 CPLX3Q8WVH0 158 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 NKD2Q969F2 451 aaPredicted RBP6.83□□□□□ -1.32
AP3S1-202ENST00000395548 RMDN1Q96DB5 314 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 SIGLEC10Q96LC7 697 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 JMJD8Q96S16 334 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 ZNF341Q9BYN7 854 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 LNPKQ9C0E8 428 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 GBP3Q9H0R5 595 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 NOL6Q9H6R4 1146 aaKnown RBP6.83□□□□□ -1.32
AP3S1-202ENST00000395548 WHRNQ9P202 907 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 IMPACTQ9P2X3 320 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 KCTD3Q9Y597 815 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 IRAK3Q9Y616 596 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 WDR87Q6ZQQ6 2873 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 MAST4O15021 2626 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 COL4A1P02462 1669 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 ECM29Q5VYK3 1845 aa6.83□□□□□ -1.32
AP3S1-202ENST00000395548 CACNA1HO95180 2353 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 AOX1Q06278 1338 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 MYO15AQ9UKN7 3530 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 PLXNA1Q9UIW2 1896 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 TLDC2A0PJX2 215 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 TCP10L2B9ZVM9 353 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 F8W031 263 aaPredicted RBP6.82□□□□□ -1.32
AP3S1-202ENST00000395548 N4BP3O15049 544 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 FGF10O15520 208 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms