RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 PBXIP1Q96AQ6 731 aa21.57■■□□□ 1.04
COL11A2-204ENST00000395194 INO80BQ9C086 356 aaPredicted RBP21.57■■□□□ 1.04
COL11A2-204ENST00000395194 TBC1D13Q9NVG8 400 aa21.57■■□□□ 1.04
COL11A2-204ENST00000395194 TPCN1Q9ULQ1 816 aa21.57■■□□□ 1.04
COL11A2-204ENST00000395194 COL4A3BPQ9Y5P4 624 aa21.57■■□□□ 1.04
COL11A2-204ENST00000395194 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.56■■□□□ 1.04
COL11A2-204ENST00000395194 FAM205CA6NFA0 338 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 MARCH6O60337 910 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 CLASP2O75122 1294 aaKnown RBP21.56■■□□□ 1.04
COL11A2-204ENST00000395194 CDKL5O76039 1030 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 CXCL14O95715 111 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 WEE2P0C1S8 567 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 POLGP54098 1239 aaPredicted RBP21.56■■□□□ 1.04
COL11A2-204ENST00000395194 EARS2Q5JPH6 523 aaKnown RBP21.56■■□□□ 1.04
COL11A2-204ENST00000395194 NCAPH2Q6IBW4 605 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 GLB1LQ6UWU2 654 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 MRPL43Q8N983 215 aaKnown RBP21.56■■□□□ 1.04
COL11A2-204ENST00000395194 BCL7CQ8WUZ0 217 aaPredicted RBP21.56■■□□□ 1.04
COL11A2-204ENST00000395194 CASP10Q92851 521 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 CEP170P1Q96L14 293 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 NRDE2Q9H7Z3 1164 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 IFT122Q9HBG6 1241 aa21.56■■□□□ 1.04
COL11A2-204ENST00000395194 B4GALT3O60512 393 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 SRGAP2CP0DJJ0 459 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 RNASELQ05823 741 aaKnown RBP21.55■■□□□ 1.04
COL11A2-204ENST00000395194 NOMO2Q5JPE7 1267 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 FAM177A1Q8N128 213 aaPredicted RBP21.55■■□□□ 1.04
COL11A2-204ENST00000395194 SLC7A3Q8WY07 619 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 HAS1Q92839 578 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 FAM20AQ96MK3 541 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 JPH2Q9BR39 696 aaPredicted RBP21.55■■□□□ 1.04
COL11A2-204ENST00000395194 LXNQ9BS40 222 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 ZBP1Q9H171 429 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 MINDY3Q9H8M7 445 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 RGL1Q9NZL6 768 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 DNAJB4Q9UDY4 337 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 STK36Q9NRP7 1315 aa21.55■■□□□ 1.04
COL11A2-204ENST00000395194 PFKFB2O60825 505 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 P4HBP07237 508 aaKnown RBP21.54■■□□□ 1.04
COL11A2-204ENST00000395194 HOXB8P17481 243 aaPredicted RBP21.54■■□□□ 1.04
COL11A2-204ENST00000395194 XBP1P17861 261 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 CYP4A11Q02928 519 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 PPP4R3AQ6IN85 833 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 KANK3Q6NY19 840 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 ZBTB33Q86T24 672 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 C12orf76Q8N812 135 aaPredicted RBP21.54■■□□□ 1.04
COL11A2-204ENST00000395194 TMEM87AQ8NBN3 555 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 POMKQ9H5K3 350 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 AGPAT5Q9NUQ2 364 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 PCDHB2Q9Y5E7 798 aa21.54■■□□□ 1.04
COL11A2-204ENST00000395194 ZBTB39O15060 712 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 OFD1O75665 1012 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 CTDNEP1O95476 244 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 GCFC2P16383 781 aaKnown RBP21.53■■□□□ 1.04
COL11A2-204ENST00000395194 MRE11P49959 708 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 RAB27AP51159 221 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 FOSBP53539 338 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 NR5A1Q13285 461 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 CTTNQ14247 550 aaKnown RBP21.53■■□□□ 1.04
COL11A2-204ENST00000395194 TPRNQ4KMQ1 711 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 RARS2Q5T160 578 aaKnown RBP21.53■■□□□ 1.04
COL11A2-204ENST00000395194 IER5LQ5T953 404 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 PRPF31Q8WWY3 499 aaKnown RBP21.53■■□□□ 1.04
COL11A2-204ENST00000395194 PSPC1Q8WXF1 523 aaKnown RBP21.53■■□□□ 1.04
COL11A2-204ENST00000395194 IGSF21Q96ID5 467 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 DYDC2Q96IM9 177 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 TRAIPQ9BWF2 469 aa21.53■■□□□ 1.04
COL11A2-204ENST00000395194 DHX33Q9H6R0 707 aaKnown RBP21.53■■□□□ 1.04
COL11A2-204ENST00000395194 ORC3Q9UBD5 711 aaPredicted RBP21.53■■□□□ 1.04
COL11A2-204ENST00000395194 TDRD15B5MCY1 1934 aaKnown RBP21.53■■□□□ 1.04
COL11A2-204ENST00000395194 DKC1O60832 514 aaKnown RBP eCLIP21.52■■□□□ 1.04
COL11A2-204ENST00000395194 GALTP07902 379 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 SKIP12755 728 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 EPCAMP16422 314 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 YWHABP31946 246 aaKnown RBP21.52■■□□□ 1.04
COL11A2-204ENST00000395194 SLC11A1P49279 550 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 SIGLEC14Q08ET2 396 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 LAMTOR4Q0VGL1 99 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 BMS1Q14692 1282 aaKnown RBP21.52■■□□□ 1.04
COL11A2-204ENST00000395194 EMC2Q15006 297 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 EPHA7Q15375 998 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 PTPN21Q16825 1174 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 XKR9Q5GH70 373 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 CES5AQ6NT32 575 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 AGMOQ6ZNB7 445 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 BMP8AQ7Z5Y6 402 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 ZNF280BQ86YH2 543 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 SUGP1Q8IWZ8 645 aaKnown RBP21.52■■□□□ 1.04
COL11A2-204ENST00000395194 NECAB1Q8N987 351 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 PRSS33Q8NF86 280 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 KCNH6Q9H252 994 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 C2orf16Q68DN1 1984 aa21.52■■□□□ 1.04
COL11A2-204ENST00000395194 C2CD4DB7Z1M9 353 aa21.51■■□□□ 1.03
COL11A2-204ENST00000395194 ZNF623O75123 536 aa21.51■■□□□ 1.03
COL11A2-204ENST00000395194 SSBP05455 408 aaKnown RBP eCLIP21.51■■□□□ 1.03
COL11A2-204ENST00000395194 AFF1P51825 1210 aaKnown RBP21.51■■□□□ 1.03
COL11A2-204ENST00000395194 AK2P54819 239 aa21.51■■□□□ 1.03
COL11A2-204ENST00000395194 DDX53Q86TM3 631 aaKnown RBP21.51■■□□□ 1.03
COL11A2-204ENST00000395194 RNF149Q8NC42 400 aa21.51■■□□□ 1.03
COL11A2-204ENST00000395194 FEZF2Q8TBJ5 459 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms