RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 GJD2Q9UKL4 321 aa12.69□□□□□ -0.38
RTN1-203ENST00000395090 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
RTN1-203ENST00000395090 KIAA1217Q5T5P2 1943 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 MYMKA6NI61 221 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 DDX39AO00148 427 aaKnown RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 EYA4O95677 639 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 SNAI1O95863 264 aaPredicted RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 RPN1P04843 607 aaKnown RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 XRCC6P12956 609 aaKnown RBP eCLIP12.68□□□□□ -0.38
RTN1-203ENST00000395090 SNRPBP14678 240 aaKnown RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 MRE11P49959 708 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 SLC12A3P55017 1021 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 CYP4A11Q02928 519 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 GRM1Q13255 1194 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 CTTNQ14247 550 aaKnown RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 NEDD9Q14511 834 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 DPCR1Q3MIW9 517 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 CT47A1Q5JQC4 288 aaPredicted RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 TPH2Q8IWU9 490 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 RGL4Q8IZJ4 473 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 GPR152Q8TDT2 470 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 MAML3Q96JK9 1138 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 ZSWIM4Q9H7M6 989 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 JPH1Q9HDC5 661 aaPredicted RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 WRAP73Q9P2S5 460 aaPredicted RBP12.68□□□□□ -0.38
RTN1-203ENST00000395090 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 POLIQ9UNA4 740 aa12.68□□□□□ -0.38
RTN1-203ENST00000395090 A0A087WWV3 80 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 PVALEFA0A1B0GWK0 134 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 IGHA2P01877 340 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 PCSK2P16519 638 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 QARSP47897 775 aaKnown RBP12.67□□□□□ -0.38
RTN1-203ENST00000395090 ZNF165P49910 485 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 ARSDP51689 593 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 ARSHQ5FYA8 562 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 TAPT1Q6NXT6 567 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 ABHD15Q6UXT9 468 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 C4orf19Q8IY42 314 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 MLKLQ8NB16 471 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 NPLOC4Q8TAT6 608 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 TINF2Q9BSI4 451 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 KATNBL1Q9H079 304 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 VTA1Q9NP79 307 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 RMND1Q9NWS8 449 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 TCEAL9Q9UHQ7 104 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 SYNGAP1Q96PV0 1343 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 PLXNB2O15031 1838 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 ZNF236Q9UL36 1845 aa12.67□□□□□ -0.38
RTN1-203ENST00000395090 IGKV6D-21A0A0A0MT36 114 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 LCE2BO14633 110 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 FARP2O94887 1054 aaPredicted RBP12.66□□□□□ -0.38
RTN1-203ENST00000395090 RHOBTB3O94955 611 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 PDGFAP04085 211 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 UBA1P22314 1058 aaKnown RBP12.66□□□□□ -0.38
RTN1-203ENST00000395090 ACTR2P61160 394 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 PSMC5P62195 406 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 IQCB1Q15051 598 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 UVSSAQ2YD98 709 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 SAMD5Q5TGI4 173 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 C11orf57Q6ZUT1 292 aaPredicted RBP12.66□□□□□ -0.38
RTN1-203ENST00000395090 CYFIP1Q7L576 1253 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 EEPD1Q7L9B9 569 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 SCFD2Q8WU76 684 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 PIK3R5Q8WYR1 880 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 DNAJC19Q96DA6 116 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 CEP63Q96MT8 703 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 LXNQ9BS40 222 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 GTPBP4Q9BZE4 634 aaKnown RBP12.66□□□□□ -0.38
RTN1-203ENST00000395090 NAT10Q9H0A0 1025 aaKnown RBP12.66□□□□□ -0.38
RTN1-203ENST00000395090 SAMM50Q9Y512 469 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 LRRC37A2A6NM11 1700 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 ARIH2O95376 493 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 PSAPP07602 524 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 CYP11B2P19099 503 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 CTGFP29279 349 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 EHHADHQ08426 723 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 DHX8Q14562 1220 aaKnown RBP12.66□□□□□ -0.38
RTN1-203ENST00000395090 LY6KQ17RY6 165 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 CELF3Q5SZQ8 465 aaKnown RBP12.66□□□□□ -0.38
RTN1-203ENST00000395090 METTL7BQ6UX53 244 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 TMC7Q7Z402 723 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 PIGOQ8TEQ8 1089 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 BHMT2Q9H2M3 363 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 CBX8Q9HC52 389 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 DBR1Q9UK59 544 aaKnown RBP12.66□□□□□ -0.38
RTN1-203ENST00000395090 TELO2Q9Y4R8 837 aa12.66□□□□□ -0.38
RTN1-203ENST00000395090 PLXNA1Q9UIW2 1896 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 GSTTP1A0A1W2PQM5 241 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 STBD1O95210 358 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 VEGFBP49765 207 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
RTN1-203ENST00000395090 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms