RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 EPHB4P54760 987 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 HNRNPH2P55795 449 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 DLG4P78352 724 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 C1orf220Q5T0J3 134 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 NSMFQ6X4W1 530 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 DNAAF5Q86Y56 855 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 GLYCTKQ8IVS8 523 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 SYCE1Q8N0S2 351 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 PCIF1Q9H4Z3 704 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 HSPBP1Q9NZL4 362 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 SUCLA2Q9P2R7 463 aaPredicted RBP16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 TISP43B9A030 160 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 ZBTB7AO95365 584 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 TMEM253P0C7T8 217 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 CETN1Q12798 172 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 EPC2Q52LR7 807 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 CAVIN3Q969G5 261 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 MOV10L1Q9BXT6 1211 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 SRCAPQ6ZRS2 3230 aa16.65■□□□□ 0.26
UBE2D3-207ENST00000394801 NCANO14594 1321 aa16.64■□□□□ 0.26
UBE2D3-207ENST00000394801 EMSYQ7Z589 1322 aa16.64■□□□□ 0.26
UBE2D3-207ENST00000394801 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 TMEM150BA6NC51 233 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 AGPSO00116 658 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 KCNK3O14649 394 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 NR3C2P08235 984 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 CCND2P30279 289 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 PEX3P56589 373 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 PPP3CAQ08209 521 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 IFT20Q8IY31 132 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 HVCN1Q96D96 273 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 GDAP1L1Q96MZ0 367 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 HINFPQ9BQA5 517 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 NTPCRQ9BSD7 190 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 TSPYL1Q9H0U9 437 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 PCDHA10Q9Y5I2 948 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 FOXN3O00409 490 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 ATP2A1O14983 1001 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 GLI1P08151 1106 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 DSG3P32926 999 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 MRPS25P82663 173 aaKnown RBP16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 NNTQ13423 1086 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 XKR9Q5GH70 373 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 ANO5Q75V66 913 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 SH2D3AQ9BRG2 576 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 MAF1Q9H063 256 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 GPRC5CQ9NQ84 441 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 ZNF214Q9UL59 606 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-207ENST00000394801 C19orf81C9J6K1 198 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 SLC16A4O15374 487 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 CLSTN1O94985 981 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 DNA2P51530 1060 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 SND1Q7KZF4 910 aaKnown RBP eCLIP16.63■□□□□ 0.253e-6■□□□□ 8.1
UBE2D3-207ENST00000394801 PEX26Q7Z412 305 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 NLRX1Q86UT6 975 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 NT5DC3Q86UY8 548 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 TMEM161BQ8NDZ6 487 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 RFFLQ8WZ73 363 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 ZKSCAN4Q969J2 545 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 CALR3Q96L12 384 aaKnown RBP16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 C17orf75Q9HAS0 396 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 PICK1Q9NRD5 415 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 PPATQ06203 517 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 RASGEF1CQ8N431 466 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 PLEKHO2Q8TD55 490 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 SPIRE2Q8WWL2 714 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 HES6Q96HZ4 224 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 GOLPH3Q9H4A6 298 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 EXOC7Q9UPT5 735 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 GJA3Q9Y6H8 435 aa16.63■□□□□ 0.25
UBE2D3-207ENST00000394801 RNF40O75150 1001 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 STBD1O95210 358 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 TNFAIP3P21580 790 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 GGCXP38435 758 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 SMTNP53814 917 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 TNNC1P63316 161 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 ARHGAP44Q17R89 818 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 FAM102BQ5T8I3 360 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 PLA2G4FQ68DD2 849 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 OTUD6AQ7L8S5 288 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 METTL13Q8N6R0 699 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 NSUN6Q8TEA1 469 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 WRNIP1Q96S55 665 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 KRT12Q99456 494 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 MTFR1LQ9H019 292 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 TBX20Q9UMR3 447 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 ANKRD62A6NC57 917 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 DKC1O60832 514 aaKnown RBP eCLIP16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 RGS20O76081 388 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 HEXIM1O94992 359 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 KCNA2P16389 499 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 ADSSP30520 456 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 NPTX2P47972 431 aa16.62■□□□□ 0.25
UBE2D3-207ENST00000394801 ZSWIM2Q8NEG5 633 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms