RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ODR4Q5SWX8 454 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 OR8H2Q8N162 312 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 CLMNQ96JQ2 1002 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 PCDHA5Q9Y5H7 936 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 MYO1GB0I1T2 1018 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 NDUFA10O95299 355 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 PPIDQ08752 370 aaKnown RBP14.19□□□□□ -0.14
USP49-203ENST00000394253 PPP1R14AQ96A00 147 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 PRRG3Q9BZD7 231 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 MFN2O95140 757 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 SYCP2LQ5T4T6 812 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 NCOA1Q15788 1441 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 ECDO95905 644 aaPredicted RBP14.19□□□□□ -0.14
USP49-203ENST00000394253 SETD3Q86TU7 594 aaPredicted RBP14.19□□□□□ -0.14
USP49-203ENST00000394253 DPP10Q8N608 796 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 MOSPD2Q8NHP6 518 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 CHURC1Q8WUH1 139 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 FOPNLQ96NB1 174 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 EGFL8Q99944 293 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 HINFPQ9BQA5 517 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 CEP44Q9C0F1 390 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 CUL7Q14999 1698 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 PDZK1Q5T2W1 519 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 KRT78Q8N1N4 520 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 TEKT3Q9BXF9 490 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 PPCSQ9HAB8 311 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 TMEM63CQ9P1W3 806 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 SF3B1O75533 1304 aaKnown RBP eCLIP14.19□□□□□ -0.144e-7■■■■■ 133.7
USP49-203ENST00000394253 PI4K2BG5E9Z4 385 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
USP49-203ENST00000394253 CCNYL1Q8N7R7 359 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 STKLD1Q8NE28 680 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 EPC1Q9H2F5 836 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 RWDD2AQ9UIY3 292 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 IPPQ9Y573 584 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 GRID2IPA4D2P6 1211 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 USP39Q53GS9 565 aaKnown RBP14.19□□□□□ -0.14
USP49-203ENST00000394253 RMND5BQ96G75 393 aaPredicted RBP14.19□□□□□ -0.14
USP49-203ENST00000394253 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
USP49-203ENST00000394253 L3MBTL3Q96JM7 780 aaPredicted RBP14.19□□□□□ -0.14
USP49-203ENST00000394253 ATP6V1G3Q96LB4 118 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 MLXIPQ9HAP2 919 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 SERTAD1Q9UHV2 236 aa14.19□□□□□ -0.14
USP49-203ENST00000394253 TESPA1A2RU30 521 aaPredicted RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 ABCB6Q9NP58 842 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 ANAPC7Q9UJX3 599 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 PA2G4Q9UQ80 394 aaKnown RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 PIK3R1P27986 724 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 FAM26FQ5R3K3 315 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 SLC25A24Q6NUK1 477 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 PDCD6IPQ8WUM4 868 aaKnown RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 CHAMP1Q96JM3 812 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 SMG5Q9UPR3 1016 aaKnown RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 PEX1O43933 1283 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 TPP2P29144 1249 aaPredicted RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 CCDC144BQ3MJ40 725 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 UNC45BQ8IWX7 931 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 MNTQ99583 582 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 SLC39A2Q9NP94 309 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 XPO1O14980 1071 aaKnown RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 PPIP5K2O43314 1243 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 PLIN5Q00G26 463 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 PLEKHA7Q6IQ23 1121 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 LRRC8DQ7L1W4 858 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 CALML6Q8TD86 181 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 TMC2Q8TDI7 906 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 GJA10Q969M2 543 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 RBM17Q96I25 401 aaKnown RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 MEI1Q5TIA1 1274 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 FAM162AQ96A26 154 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 CENPTQ96BT3 561 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 TUBGCP4Q9UGJ1 667 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 NRBP1Q9UHY1 535 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 CLCA2Q9UQC9 943 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 ZNF197O14709 1029 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 POU5F1BQ06416 359 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 RBL2Q08999 1139 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 EPS8Q12929 822 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 RWDD4Q6NW29 188 aaKnown RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 ERICH1Q86X53 443 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 NSFL1CQ9UNZ2 370 aaKnown RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 ZNF644Q9H582 1327 aaPredicted RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 MED23Q9ULK4 1368 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 MEFVO15553 781 aaPredicted RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 ATP12AP54707 1039 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 CUL4AQ13619 759 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 ZCWPW2Q504Y3 356 aa14.18□□□□□ -0.14
USP49-203ENST00000394253 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
USP49-203ENST00000394253 KLHL2O95198 593 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 GGPS1O95749 300 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 CALB1P05937 261 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 PCP11498 1178 aaKnown RBP14.17□□□□□ -0.14
USP49-203ENST00000394253 KCNA2P16389 499 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 VSNL1P62760 191 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 PRKCQQ04759 706 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 COPS6Q7L5N1 327 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 HEATR4Q86WZ0 1026 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 NUP93Q8N1F7 819 aa14.17□□□□□ -0.14
USP49-203ENST00000394253 IL17RAQ96F46 866 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms