RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 STRNO43815 780 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 LRRN2O75325 713 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 LGR5O75473 907 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 ADRB2P07550 413 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 UCHL3P15374 230 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 ARID5AQ03989 594 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 CBWD2Q8IUF1 395 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 SLC17A8Q8NDX2 589 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 SCFD2Q8WU76 684 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 TMEM174Q8WUU8 243 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 SLC7A3Q8WY07 619 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 CCDC42Q96M95 316 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 KATNBL1Q9H079 304 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 PLCB1Q9NQ66 1216 aa20.8■□□□□ 0.92
CLDND1-203ENST00000394181 DIS3Q9Y2L1 958 aaKnown RBP20.8■□□□□ 0.92
CLDND1-203ENST00000394181 ARHGAP1Q07960 439 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 ENOX2Q16206 610 aaKnown RBP20.79■□□□□ 0.92
CLDND1-203ENST00000394181 DPP9Q86TI2 863 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 TRAPPC12Q8WVT3 735 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-203ENST00000394181 ADCYAP1R1P41586 468 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 PPP3CAQ08209 521 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 RAPGEF1Q13905 1077 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 GRB14Q14449 540 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 PLCB4Q15147 1175 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 FAM110CQ1W6H9 321 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 SFMBT2Q5VUG0 894 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 CCDC170Q8IYT3 715 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 ABRAQ8N0Z2 381 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 LACRTQ9GZZ8 138 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-203ENST00000394181 CGNQ9P2M7 1197 aaKnown RBP20.79■□□□□ 0.92
CLDND1-203ENST00000394181 EXOC7Q9UPT5 735 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 PHLPP2Q6ZVD8 1323 aa20.79■□□□□ 0.92
CLDND1-203ENST00000394181 PLXNB2O15031 1838 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 EIF3CLB5ME19 914 aaKnown RBP20.78■□□□□ 0.92
CLDND1-203ENST00000394181 CYLC1P35663 651 aaPredicted RBP20.78■□□□□ 0.92
CLDND1-203ENST00000394181 VAMP7P51809 220 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 MKRN4PQ13434 485 aaPredicted RBP20.78■□□□□ 0.92
CLDND1-203ENST00000394181 PPP2R5AQ15172 486 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 ARHGAP29Q52LW3 1261 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 NPLOC4Q8TAT6 608 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 EIF3CQ99613 913 aaKnown RBP20.78■□□□□ 0.92
CLDND1-203ENST00000394181 DUSP10Q9Y6W6 482 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 LRRIQ4A6NIV6 560 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 MAFO75444 373 aaPredicted RBP20.78■□□□□ 0.92
CLDND1-203ENST00000394181 PNMA6AP0CW24 399 aaPredicted RBP20.78■□□□□ 0.92
CLDND1-203ENST00000394181 PLEKHH3Q7Z736 793 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 SAPCD2Q86UD0 394 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 HVCN1Q96D96 273 aa20.78■□□□□ 0.92
CLDND1-203ENST00000394181 EMSYQ7Z589 1322 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 LOC102724159A0A0B4J2E5 919 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 GTPBP10A4D1E9 387 aaKnown RBP20.77■□□□□ 0.92
CLDND1-203ENST00000394181 EDN1P05305 212 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 GCLMP48507 274 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 KIF11P52732 1056 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 PWP2Q15269 919 aaKnown RBP20.77■□□□□ 0.92
CLDND1-203ENST00000394181 ASTE1Q2TB18 679 aaPredicted RBP20.77■□□□□ 0.92
CLDND1-203ENST00000394181 ZNF569Q5MCW4 686 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 PLPPR4Q7Z2D5 763 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 LRRC71Q8N4P6 559 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 PRPF31Q8WWY3 499 aaKnown RBP20.77■□□□□ 0.92
CLDND1-203ENST00000394181 MAML3Q96JK9 1138 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 POP1Q99575 1024 aaKnown RBP20.77■□□□□ 0.92
CLDND1-203ENST00000394181 RNPEPQ9H4A4 650 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 SUGCTQ9HAC7 445 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 GUCA1BQ9UMX6 200 aa20.77■□□□□ 0.92
CLDND1-203ENST00000394181 HNRNPDLO14979 420 aaKnown RBP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 TUBB4AP04350 444 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 KRT13P13646 458 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 RFC5P40937 340 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 GFPT1Q06210 699 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 SNRNP35Q16560 246 aaKnown RBP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 IQCEQ6IPM2 695 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 INTS8Q75QN2 995 aaKnown RBP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 ATP8B4Q8TF62 1192 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 BBXQ8WY36 941 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 POMGNT1Q8WZA1 660 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 BICD1Q96G01 975 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 PLXNA1Q9UIW2 1896 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 CASQ1P31415 396 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 GTF2F1P35269 517 aaKnown RBP eCLIP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 SNRPFP62306 86 aaKnown RBP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 CAPSQ13938 189 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 NAA30Q147X3 362 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 LRRN4CLQ8ND94 238 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 SYN2Q92777 582 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-203ENST00000394181 CCDC127Q96BQ5 260 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 FAM84AQ96KN4 292 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 AIPL1Q9NZN9 384 aa20.76■□□□□ 0.91
CLDND1-203ENST00000394181 GJB1P08034 283 aa20.75■□□□□ 0.91
CLDND1-203ENST00000394181 KRT83P78385 493 aa20.75■□□□□ 0.91
CLDND1-203ENST00000394181 MYL7Q01449 175 aa20.75■□□□□ 0.91
CLDND1-203ENST00000394181 TDRD12Q587J7 1177 aaKnown RBP20.75■□□□□ 0.91
CLDND1-203ENST00000394181 BRDTQ58F21 947 aaPredicted RBP20.75■□□□□ 0.91
CLDND1-203ENST00000394181 IRF2BP2Q7Z5L9 587 aa20.75■□□□□ 0.91
CLDND1-203ENST00000394181 LMO3Q8TAP4 145 aa20.75■□□□□ 0.91
CLDND1-203ENST00000394181 DEPTORQ8TB45 409 aa20.75■□□□□ 0.91
CLDND1-203ENST00000394181 AFG1LQ8WV93 481 aa20.75■□□□□ 0.91
CLDND1-203ENST00000394181 ZBTB45Q96K62 511 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms