RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 DUOX1Q9NRD9 1551 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 DDAH1O94760 285 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 OR1G1P47890 313 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 BASP1P80723 227 aaKnown RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 LLGL2Q6P1M3 1020 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 RUFY3Q7L099 469 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 IER2Q9BTL4 223 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 LRFN3Q9BTN0 628 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 SUSD2Q9UGT4 822 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 GJD2Q9UKL4 321 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 KDM1AO60341 852 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 DNAJC8O75937 253 aaPredicted RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 IQCF3P0C7M6 154 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 TROVE2P10155 538 aaKnown RBP eCLIP8.81□□□□□ -1
LIMS1-203ENST00000393310 ARPP19P56211 112 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 ADAT2Q7Z6V5 191 aaKnown RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 LMNTD2Q8IXW0 634 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 DBF4BQ8NFT6 615 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 DTNBP1Q96EV8 351 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 MSANTD3Q96H12 275 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 FAM126AQ9BYI3 521 aaPredicted RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 NSRP1Q9H0G5 558 aaKnown RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 ZBTB5O15062 677 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 SPTLC1O15269 473 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 CHMP2AO43633 222 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 GPR37L1O60883 481 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 ZNF189O75820 626 aaPredicted RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 MAGEA8P43361 318 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 KRT25Q7Z3Z0 450 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 SMC5Q8IY18 1101 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 P2RX5Q93086 422 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 CCDC51Q96ER9 411 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 CEP95Q96GE4 821 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 PPP1R9BQ96SB3 815 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 PHF20Q9BVI0 1012 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 VCX3BQ9H321 246 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 JPH1Q9HDC5 661 aaPredicted RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 DKK3Q9UBP4 350 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 ATP2A1O14983 1001 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 SLC26A4O43511 780 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 ECEL1O95672 775 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 CPB1P15086 417 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 ERVK-21P61565 698 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 GRB10Q13322 594 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 STARD3Q14849 445 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 PCBP1Q15365 356 aaKnown RBP eCLIP8.8□□□□□ -1
LIMS1-203ENST00000393310 NAIF1Q69YI7 327 aaPredicted RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 ZNF662Q6ZS27 426 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 ZSCAN10Q96SZ4 725 aaPredicted RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 POLR3CQ9BUI4 534 aaPredicted RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 A1CFQ9NQ94 594 aaKnown RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 RGPD5Q99666 1765 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 GJB5O95377 273 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 NAT1P18440 290 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 EPHB3P54753 998 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 RPS6P62753 249 aaKnown RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 LCORLQ8N3X6 602 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 MSANTD4Q8NCY6 345 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 SPATA17Q96L03 361 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 BTBD7Q9P203 1132 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 DDX39AO00148 427 aaKnown RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 SLC9A3R1O14745 358 aaPredicted RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 NDUFS2O75306 463 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 KRT10P13645 584 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 RABGGTBP53611 331 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 MAP3K21Q5TCX8 1036 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 GALNT17Q6IS24 598 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 PPP1R18Q6NYC8 613 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 MAMDC4Q6UXC1 1216 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 DSTYKQ6XUX3 929 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 SLC24A5Q71RS6 500 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 EFCAB13Q8IY85 973 aa8.8□□□□□ -1
LIMS1-203ENST00000393310 MRPS31Q92665 395 aaKnown RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 NUP88Q99567 741 aaPredicted RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 PIH1D3Q9NQM4 214 aaKnown RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 PIN4Q9Y237 131 aaKnown RBP8.8□□□□□ -1
LIMS1-203ENST00000393310 ZC3H11AO75152 810 aaKnown RBP eCLIP8.79□□□□□ -1
LIMS1-203ENST00000393310 INAQ16352 499 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 NDUFAF2Q8N183 169 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 GDPD5Q8WTR4 605 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 SHISA4Q96DD7 197 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 CALML4Q96GE6 196 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 ZNF577Q9BSK1 485 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 HOOK1Q9UJC3 728 aaKnown RBP8.79□□□□□ -1
LIMS1-203ENST00000393310 P4HA1P13674 534 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 CCDC38Q502W7 563 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 SYCP2LQ5T4T6 812 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 GKAP1Q5VSY0 366 aaPredicted RBP8.79□□□□□ -1
LIMS1-203ENST00000393310 TRIM67Q6ZTA4 783 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 TRMT11Q7Z4G4 463 aaKnown RBP8.79□□□□□ -1
LIMS1-203ENST00000393310 REXO1Q8N1G1 1221 aaKnown RBP8.79□□□□□ -1
LIMS1-203ENST00000393310 CMTR1Q8N1G2 835 aaKnown RBP8.79□□□□□ -1
LIMS1-203ENST00000393310 FSIP1Q8NA03 581 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 MYRIPQ8NFW9 859 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 IRF7Q92985 503 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 TCF25Q9BQ70 676 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 KRT82Q9NSB4 513 aa8.79□□□□□ -1
LIMS1-203ENST00000393310 TRMT1Q9NXH9 659 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms