RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 VIMP08670 466 aaKnown RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 YWHABP31946 246 aaKnown RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 SLCO1A2P46721 670 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 GLE1Q53GS7 698 aaKnown RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 ALS2CLQ60I27 953 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 SNRNP48Q6IEG0 339 aaKnown RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 ARMC2Q8NEN0 867 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 SLC35G2Q8TBE7 412 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 GLIS2Q9BZE0 524 aaPredicted RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 BCAS3Q9H6U6 928 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.35□□□□□ -0.59
CALD1-203ENST00000393118 GABBR1Q9UBS5 961 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 SLITRK3O94933 977 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 CD19P15391 556 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 BFSP1Q12934 665 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 MTMR3Q13615 1198 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 DCAF15Q66K64 600 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 MOXD1Q6UVY6 613 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 ZNF365Q70YC5 407 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 CYFIP1Q7L576 1253 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 MMGT1Q8N4V1 131 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 MGARPQ8TDB4 240 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 WRNIP1Q96S55 665 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.35□□□□□ -0.592e-7■□□□□ 11.1
CALD1-203ENST00000393118 DNAJC17Q9NVM6 304 aaKnown RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 APEX2Q9UBZ4 518 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 PHLPP1O60346 1717 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 WDR64B1ANS9 1081 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 NOP56O00567 594 aaKnown RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 NR1D1P20393 614 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 SSTR3P32745 418 aaPredicted RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 Q4G0T1 1027 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 SWSAP1Q6NVH7 229 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 SH3BP5LQ7L8J4 393 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 WHAMMQ8TF30 809 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 ELMO3Q96BJ8 720 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 MXRA8Q9BRK3 442 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 TMX2Q9Y320 296 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 CYP26A1O43174 497 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 KRT19P08727 400 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 DR1Q01658 176 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 TRIP13Q15645 432 aaPredicted RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 OR2W6PQ8NHA6 318 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 RNF217Q8TC41 542 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 MKL1Q969V6 931 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 FAM213AQ9BRX8 229 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 CELF4Q9BZC1 486 aaKnown RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 TTYH3Q9C0H2 523 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 ZNRF3Q9ULT6 936 aa11.35□□□□□ -0.59
CALD1-203ENST00000393118 NOVA2Q9UNW9 492 aaKnown RBP11.35□□□□□ -0.59
CALD1-203ENST00000393118 SLC16A3O15427 465 aaKnown RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 TTI1O43156 1089 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 GLI1P08151 1106 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 DPEP1P16444 411 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 BAATQ14032 418 aaPredicted RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 DCUN1D2Q6PH85 259 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 OTOP1Q7RTM1 612 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 TCP11Q8WWU5 503 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 RFFLQ8WZ73 363 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 SYN2Q92777 582 aaPredicted RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 FMO2Q99518 471 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 CBWD1Q9BRT8 395 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 STK33Q9BYT3 514 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 PPP1R12CQ9BZL4 782 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 OSGEPQ9NPF4 335 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 TISP43B9A030 160 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 SPATA31C1P0DKV0 1188 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 PIK3CAP42336 1068 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 TRPC3Q13507 836 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 NCAPG2Q86XI2 1143 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 SLC35C1Q96A29 364 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 TAAR1Q96RJ0 339 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 HSPBP1Q9NZL4 362 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 GRID2IPA4D2P6 1211 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 MAP2K7O14733 419 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 RGS16O15492 202 aaPredicted RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 MAPK4P31152 587 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 NSFP46459 744 aaKnown RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 HMGCS2P54868 508 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 LIN9Q5TKA1 542 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 SUGP1Q8IWZ8 645 aaKnown RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 TAB3Q8N5C8 712 aaPredicted RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 ETNPPLQ8TBG4 499 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 TAF1DQ9H5J8 278 aaPredicted RBP11.34□□□□□ -0.59
CALD1-203ENST00000393118 VIPAS39Q9H9C1 493 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 TBC1D22BQ9NU19 505 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 SALL4Q9UJQ4 1053 aa11.34□□□□□ -0.59
CALD1-203ENST00000393118 IGKV6D-41A0A0C4DH26 115 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 FOXN3O00409 490 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms