RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 PTPAQ15257 358 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 MAD2L2Q9UI95 211 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 NMT1P30419 496 aaKnown RBP13.52□□□□□ -0.24
CLTC-202ENST00000393043 MTF1Q14872 753 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 SLC18A3Q16572 532 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 KYAT1Q16773 422 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 NXNQ6DKJ4 435 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 C11orf70Q9BRQ4 267 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 AGXT2Q9BYV1 514 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 NUF2Q9BZD4 464 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 AGO2Q9UKV8 859 aaKnown RBP13.52□□□□□ -0.24
CLTC-202ENST00000393043 IQANK1A0A1B0GTG1 560 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 RGL2O15211 777 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 KPNA2P52292 529 aaKnown RBP13.52□□□□□ -0.24
CLTC-202ENST00000393043 WDR24Q96S15 920 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 PPP1R16BQ96T49 567 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 TEX13BQ9BXU2 312 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 NGRNQ9NPE2 291 aaKnown RBP13.52□□□□□ -0.24
CLTC-202ENST00000393043 IP6K2Q9UHH9 426 aa13.52□□□□□ -0.24
CLTC-202ENST00000393043 A0A1W2PQJ5 194 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 GLYCTKQ8IVS8 523 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 C2orf69Q8N8R5 385 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 TUBB6Q9BUF5 446 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 TMEM60Q9H2L4 133 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 ZWILCHQ9H900 591 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 RBAKQ9NYW8 714 aaPredicted RBP13.52□□□□□ -0.25
CLTC-202ENST00000393043 TYW5A2RUC4 315 aaKnown RBP13.52□□□□□ -0.25
CLTC-202ENST00000393043 ZBTB7AO95365 584 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 GNA15P30679 374 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 CASP7P55210 303 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 NR1H3Q13133 447 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 TC2NQ8N9U0 490 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 SAAL1Q96ER3 474 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 RIT2Q99578 217 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 STK33Q9BYT3 514 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 PXDNQ92626 1479 aa13.52□□□□□ -0.25
CLTC-202ENST00000393043 A0A087WUV0 522 aaPredicted RBP13.51□□□□□ -0.25
CLTC-202ENST00000393043 TADA3O75528 432 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 ATP1A1P05023 1023 aaKnown RBP13.51□□□□□ -0.25
CLTC-202ENST00000393043 GSTA1P08263 222 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 GSTA2P09210 222 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 CLTAP09496 248 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 RPA1P27694 616 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 ARL4CP56559 192 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 ZNF394Q53GI3 561 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 XKR3Q5GH77 459 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 DSTYKQ6XUX3 929 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 BEST2Q8NFU1 509 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 ACTR5Q9H9F9 607 aaPredicted RBP13.51□□□□□ -0.25
CLTC-202ENST00000393043 MID2Q9UJV3 735 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 SNX12Q9UMY4 172 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 ASB14A6NK59 587 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 SAT1P21673 171 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 MUM1L1Q5H9M0 696 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 FASTKD5Q7L8L6 764 aaKnown RBP13.51□□□□□ -0.25
CLTC-202ENST00000393043 TTC25Q96NG3 672 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 MMP19Q99542 508 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 AGPAT1Q99943 283 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 KLC2Q9H0B6 622 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 TAF1DQ9H5J8 278 aaPredicted RBP13.51□□□□□ -0.25
CLTC-202ENST00000393043 LRFN2Q9ULH4 789 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 NCK2O43639 380 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 FXR1P51114 621 aaKnown RBP eCLIP13.51□□□□□ -0.254e-7■■■■□ 25.9
CLTC-202ENST00000393043 TERF2Q15554 542 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 ZKSCAN8Q15776 578 aaPredicted RBP13.51□□□□□ -0.25
CLTC-202ENST00000393043 RAPH1Q70E73 1250 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 CLEC10AQ8IUN9 316 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.51□□□□□ -0.253e-10■■■■■ 88.3
CLTC-202ENST00000393043 HPS3Q969F9 1004 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 HDAC6Q9UBN7 1215 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 TBK1Q9UHD2 729 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 ADAM21Q9UKJ8 722 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 EIF3DO15371 548 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLTC-202ENST00000393043 KRT7P08729 469 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 TAP1Q03518 808 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 MTMR2Q13614 643 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 PSMD6Q15008 389 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 RHOT1Q8IXI2 618 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 CHP1Q99653 195 aa13.51□□□□□ -0.25
CLTC-202ENST00000393043 ACSL3O95573 720 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 HMGCS2P54868 508 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 SNRPFP62306 86 aaKnown RBP13.5□□□□□ -0.25
CLTC-202ENST00000393043 SNCBQ16143 134 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 MUM1Q2TAK8 710 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
CLTC-202ENST00000393043 RHPN2Q8IUC4 686 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 SPATA4Q8NEY3 305 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 MKNK1Q9BUB5 465 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 DONSONQ9NYP3 566 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 NPHP3-ACAD11A0A0J9YXS1 232 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
CLTC-202ENST00000393043 DUOXA2Q1HG44 320 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 XRRA1Q6P2D8 792 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 RNF139Q8WU17 664 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 HSPH1Q92598 858 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 APEX2Q9UBZ4 518 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 MAFGO15525 162 aa13.5□□□□□ -0.25
CLTC-202ENST00000393043 RTN2O75298 545 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms